Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3840g00002 ATGGCACCTATCACTTGCTCTGCACCTTCAGTTGTTAGCAAGAAGAAGGTTCTCTTCATAATGGGTGCAACTGGCACTGGCAAAACCAAGCTTTCCATCAACTTGGGCACTCAATTCCCCTCAGAGATCATAAACTCTGACAAAATCCAAGTCTACAAGGGCCTTGACATCATCACCAACAAGGTGCAAGAGTCTGAACGTTGTGCCATTCCCCATCACCTATTAGGCATCATCGACGATCTTGATTATGACTTCACCGTTGATGACTTTTGCAAGCGTGTCCTTGATACTCTTGATCTCATCATTGAAAATGATCACTTACCCATTATTGTGGGAGGCTCAAACACTTACCTCACAACACTACTTGAAGACCCCAATATTGCATTTCGTTCTAAATATGATTGTTGCTTTATTTGGCTCGATGTGTCTTTGCCTGTGCTATTTCAATATTTAGATAAAAGGGTGGATGAAATGCTTGATGCAGGAGTCGTGGATGAGATTCGAGAAGTTTTTGTGCCTGGAGCAGATTACTCTCGTGGGATTAGAAGAGCCATTGGGGTTCCCGAGCTGGGAGATTATTTCCTAGTAGAGAAGGAAATAACTGAAGAGGCTCAAAAGGAGAAGATGCTACAACATGCCATTGCGAAAACCAAAGAGAACACTTGTAACTTGGCTGAGATGCAACTATTAAAAATTCATAGGATGAATTATGAGCTTGGATGGGGAATGTCCAAAATTGATTCCACACAAGTGTTTGAGGCTATTTTAAAAGGAGAGGATTATAAGAAATTGTACCAAGAGATTGTGTATAAACCAAGCATGGAGATAGTGATAAGGTTTCTAGAGGAGACAACTCAAGAAGGGGGAAAGACACCACACCAAAATGGAGAGCAAGTAGTGAATTTTGCTTCAAACAACATTAAATCTGGCTAA 933 0.4116 MAPITCSAPSVVSKKKVLFIMGATGTGKTKLSINLGTQFPSEIINSDKIQVYKGLDIITNKVQESERCAIPHHLLGIIDDLDYDFTVDDFCKRVLDTLDLIIENDHLPIIVGGSNTYLTTLLEDPNIAFRSKYDCCFIWLDVSLPVLFQYLDKRVDEMLDAGVVDEIREVFVPGADYSRGIRRAIGVPELGDYFLVEKEITEEAQKEKMLQHAIAKTKENTCNLAEMQLLKIHRMNYELGWGMSKIDSTQVFEAILKGEDYKKLYQEIVYKPSMEIVIRFLEETTQEGGKTPHQNGEQVVNFASNNIKSG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3840g00002 310 FunFam Adenylate isopentenyltransferase 5, chloroplastic 144 243 - -
Mupr3840g00002 310 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 243 - -
Mupr3840g00002 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 194 IPR027417 -
Mupr3840g00002 310 Pfam IPP transferase 131 229 - -
Mupr3840g00002 310 Pfam IPP transferase 50 124 - -
Mupr3840g00002 310 Gene3D - 14 281 IPR027417 -
Mupr3840g00002 310 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 14 280 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3840g00002 Mupr-Chr3840 16217 17149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3840g00002 131 292 C2H2 Transcription Factor Family AT2G27760 32.979 4.34e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3840g00002 K10760 - gmx:121173984 518.079