Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3839g00002 ATGGAGCTTGCTTCTGAGAGATCTGGTGACGGAGGTAGTGGACTCAAGGAAGAAAAGAGAATTGAGTATAGTGTTGGTGATGATGATGCTCGTCATAAACAAGAGATTATTGTCGAGGAAGCACCGGTGGCTAATAACGAAACATCCATCCTGGAGGCTGGACCTAGTGCATCCTCAAAGAAAAAGGAAGAGGTTGATGATCAGCTTGAGACTACTAAAGCTGAAATGGGTGTGGTGAGAGAAGAAAATCAACGGTTAAAGATGTGTTTGAACAAAATAATGAATGAATATCGGACACTAGAAATGCAATTTCGAGATATACTTAAGCAGCAAGGGACAAAAGAGAACGCTGATAAAGAAAATGATAACCATAAAGAAATATTAGAGGAATCGGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCGAGCAATCCAAGAAATGGTGAGAAAATCAAAGTTTCTAAACCGTTGAAGGATGACGAAGGGTTTAACAAAGAGTTGACTCTTGGACTAGACTGCAAATTTGAAACATCAAAATCCGGAAGCACAACTGAAGCTTTGCCTAATCCAAGCCCAGAAAATAGTTCGGAAGTACCAAAGGAAGAAGCTGGGGAGACTTGGCCACCCACTAAGGCACTCAAGACAATGAGAGACACAGAGGATGAAGTTGCTCAGCAAAATCCTACAAAGAAACCTCGAGTTTGCGTTAGAGCTAGATGTGACACTCCAACAATGAATGATGGATGCCAATGGAGGAAATATGGACAAAAGATTTCGAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACAATTGCACAATCATGCCCAGTAAGAAAGCAGGTGCAAAGATGTGCCGAGGACATGTCCATTTTAATCACAACCTACGAAGGGACCCACAACCACAGTCTTCCACCTTCAGCCACTGCCATGGCATCGACAACTTCCGCAGCTGCTTCCATGCTGTTGTCTGGTTCATCAACCTCTCACTCTGGCTCAATGGCTTCAGCAACCACCACGGCTTCTAACAATCTCCACGGCCTCAACTTTTACCTAGATGGTGCCAAATCAAGGCAAATATACCTATCCAACCCTGCACTATCATCTTCACCTTCACACCCTACCATCACCCTTGACCTCACTTCACACCCAGCCTCTTCCTCCTCATCCCCCTTTGTTAGATTTGCTTCAAGCTACAACCAACCCAGGTACCCCTCTTCCTCGAGCCTCAGCTTCAGTAGTTCCTCCGAAACCAATGCAATGTCTTGGAGCAACGGGTTGCTCAACAATAATAGGACTACGAACATGAACATCCTTAGCAGTGTGAACTTTGGAAGACAGCAAATGGAAAATATGTACCAATCCTACATTCAAAAGAGCAGCAACAACTCAAGCATTCCTCAAGGTGGCGTACCGGATACTATATCTGCAGCAACGAAAGTAATCACGGCAGACCCCACTTTTCAATCGGCTTTGGCGGCGGCGCTTACTTCGTTTATTGGGGGAGGTGGTGGTGGTGGTGTTGGTGTTGGAAGCACGCGAGGAAATAATCAAGATGTTAATAATGTTGGTGAAAGTTTGGGTCAGAAAATGAAGTGGGCAGAGGTGTTTCCAGCGTCTAATTCTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTCAACAAAGCACCCGCCAATGCACAGACGAAAAGTTCGATGTTTCTACCGCCGTCTTTGCCTTTTTCGGCCCCCAAGAGTGCTTCTGCATCTCCTGCTGATAATAGCGACACCACTACCAATTAG 1785 0.4527 MELASERSGDGGSGLKEEKRIEYSVGDDDARHKQEIIVEEAPVANNETSILEAGPSASSKKKEEVDDQLETTKAEMGVVREENQRLKMCLNKIMNEYRTLEMQFRDILKQQGTKENADKENDNHKEILEESDLVSLSLGRVPSNPRNGEKIKVSKPLKDDEGFNKELTLGLDCKFETSKSGSTTEALPNPSPENSSEVPKEEAGETWPPTKALKTMRDTEDEVAQQNPTKKPRVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTIAQSCPVRKQVQRCAEDMSILITTYEGTHNHSLPPSATAMASTTSAAASMLLSGSSTSHSGSMASATTTASNNLHGLNFYLDGAKSRQIYLSNPALSSSPSHPTITLDLTSHPASSSSSPFVRFASSYNQPRYPSSSSLSFSSSSETNAMSWSNGLLNNNRTTNMNILSSVNFGRQQMENMYQSYIQKSSNNSSIPQGGVPDTISAATKVITADPTFQSALAAALTSFIGGGGGGGVGVGSTRGNNQDVNNVGESLGQKMKWAEVFPASNSSKVNGCASSFFNKAPANAQTKSSMFLPPSLPFSAPKSASASPADNSDTTTN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 1 74 - -
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 565 594 - -
Mupr3839g00002 594 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 519 IPR044810 GO:0003700
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 577 594 - -
Mupr3839g00002 594 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 11 38 - -
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 136 155 - -
Mupr3839g00002 594 SUPERFAMILY WRKY DNA-binding domain 238 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr3839g00002 594 Pfam WRKY DNA -binding domain 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 178 211 - -
Mupr3839g00002 594 FunFam probable WRKY transcription factor 31 230 307 - -
Mupr3839g00002 594 Coils Coil 90 110 - -
Mupr3839g00002 594 Gene3D WRKY domain 230 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mupr3839g00002 594 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mupr3839g00002 594 Coils Coil 62 82 - -
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 178 196 - -
Mupr3839g00002 594 MobiDBLite consensus disorder prediction 57 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3839g00002 Mupr-Chr3839 32978 37109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3839g00002 65 503 WRKY Transcription Factor Family AT1G18860 39.921 6.37e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mupr3839g00002 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3839g00002 - - pvu:PHAVU_003G192000g 776.933