Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3835g00005 ATGAAAAGAAGCTCCTCATCCTCCTCTTCTTCGTATTCTTCTGCTTCTGTTTCTGCTTCGGAGTCCACCCCAGGAGGAGGCAATGATAATAATAACAAGAAGAATAAGAATTGTAACAGAATAAAAGGCCCATGGAACGCGGAAGAAGATGGAATCCTGACCCGGCTGGTGGAAACCCACGGGCCGCGAAACTGGGCCTTGATAAGTCGCTCCATAAAGGGCAGGTCTGGGAAGTCGTGCAGGCTTCGCTGGTGTAACCAACTAAGTCCCGCGGTGGAGCACCGACCCTTCTCCACGCGCGAGGACGAGGTTATCCTACACGCGCACACCCGCTTCGGGAACAAGTGGGCCACCATTGCCAGATTGTTACCGGGCCGAACCGATAACGCCGTCAAGAACCATTGGAACGCCACGCTCAAGCGTAGGGCCACCCAACGCCGTCCTTTTCATGCTGACCTGGACGATGACCCCTTCACCCGGTTGACTCTGGCGCCGCCGGGGAGTGGTTCTTCTGTCGCCGTCCACCACGACCGCCGACAAGTTTCGCCGCCGGGGTTTTTGGATGCTATGCGAGATGTTATCTCCAGGGAAGGATTTTCTGCTCTTTAA 609 0.5534 MKRSSSSSSSSYSSASVSASESTPGGGNDNNNKKNKNCNRIKGPWNAEEDGILTRLVETHGPRNWALISRSIKGRSGKSCRLRWCNQLSPAVEHRPFSTREDEVILHAHTRFGNKWATIARLLPGRTDNAVKNHWNATLKRRATQRRPFHADLDDDPFTRLTLAPPGSGSSVAVHHDRRQVSPPGFLDAMRDVISREGFSAL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3835g00005 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 143 IPR017930 -
Mupr3835g00005 202 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Mupr3835g00005 202 FunFam MYB transcription factor 42 93 - -
Mupr3835g00005 202 MobiDBLite consensus disorder prediction 1 39 - -
Mupr3835g00005 202 SUPERFAMILY Homeodomain-like 39 135 IPR009057 -
Mupr3835g00005 202 MobiDBLite consensus disorder prediction 1 44 - -
Mupr3835g00005 202 Gene3D - 95 154 - -
Mupr3835g00005 202 PANTHER MYB PROTEIN-RELATED 37 156 - -
Mupr3835g00005 202 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
Mupr3835g00005 202 Pfam Myb-like DNA-binding domain 45 103 - -
Mupr3835g00005 202 CDD SANT 96 139 IPR001005 -
Mupr3835g00005 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 92 IPR017930 -
Mupr3835g00005 202 SMART sant 41 90 IPR001005 -
Mupr3835g00005 202 SMART sant 93 141 IPR001005 -
Mupr3835g00005 202 CDD SANT 44 86 IPR001005 -
Mupr3835g00005 202 Gene3D - 41 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3835g00005 Mupr-Chr3835 61931 62636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3835g00005 32 144 MYB Transcription Factor Family AT4G37260 73.451 1.35e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr3835g00005 Myb_DNA-bind_6 4.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3835g00005 - - gmx:100802503 255.758