Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3835g00002 ATGAGGCTAATGAAGTTGTCAATAAAATTGCTTTTGTGGTTCCATTTTTTGTCTTGGTGCCACTTTGCCATCTCATGCGACGCCAACCAACAAGGGGAATACCTCTACAAGTTTATCCGATCAAGGAAACGCTCACATGGAGAAGCTTCAATGGCTAAAAATGGTGGTGGTGATGTTGGACACTATTGGAAGGTTTATGTTGATGAGGAACAATCGGGGTTGAGGGAAGGTGACAAAGTGAAGGGTTTGCCGGGACAACCACAAGGGGTGGACTTTGATCAATATGGTGGCTATGTCACGGTGGATGCCAAGGCAGGAAGGGCACTGTTCTACTACTTTGTAGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTAAATGGAGGGCCTGGATGCTCTTCCCTTGGATATGGAGCCATGGAAGAATTAGGACCTTTCAGAGTGAACAGTGATGGAAAAACACTTGACAGAAATGAATATGCATGGAACAACGTGGCAAACGTTATTTTCCTAGAATCTCCAGCTGGAGTTGGGTTTTCATATTCAAACACTTCTTCTGACTACTCCAAAACTGGTGACAAGAGCACAGCCATAGACTCTTACACTTTTCTCGTAAACTGGCTTCAGAGATTTCCACACTACAAAACTCGAGACTTGTACATCACTGGAGAAAGCTATGCAGGCCATTATATCCCTCAGCTAGCTCACACTATTCTCTCTTACAATAAGCTTACAAATCACACACTCATCAACCTCAAAGGGATTGCCATTGGGAATGGGTGGATAGATGATAATATGTGTACAAAGGGAATGTATGACTATTTCTGGACACATGGTCTGAACTCTGACGAAACCAATGAAGGAATTCAAAGACATTGTGACTTTGAGAATGGTAACATAACAAGTGAATGCAACAAATATCAAAATAGAGGAGAGGAAGAGATTGGAAGCATTGACATATACGACATATATGCTCCCCCTTGCGATTCAACTGCAACAAAACCTGGTGCTAGTCCTGACAGGAATTTCGACCCTTGTTCTGACAATTATATCAGTTCCTACTTAAATCTCGCTGAAGTACAAGAGGCTCTTCATGCTAAAGCCTCTGAATGGTCCCCTTGCAGAGGGGTGGGATGGACAGATAGCCCAGCAACAATTCTACCCACTATAAGTCGTGGCGATACAGATGGACGTGTTCCCATAACATCGTCTAGGTATTCAGTAAATGCCTTGAAACTTCCAGTGGAGACAAAATGGCGTCCATGGTACTCTGGCAATGAGGTTGGAGGATATTTGGTTGGATACAAAGGACTCACACTCGTCACTGTAAGAGGAGCTGGCCACATGGTTCCAAGTTATCAACCACAGCGAGCGCTAACCATGATCTCATTTTTCCTTCGTGGACAACTTCCTCCCGATTTAACAACCTCTTAA 1443 0.4387 MRLMKLSIKLLLWFHFLSWCHFAISCDANQQGEYLYKFIRSRKRSHGEASMAKNGGGDVGHYWKVYVDEEQSGLREGDKVKGLPGQPQGVDFDQYGGYVTVDAKAGRALFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMEELGPFRVNSDGKTLDRNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSKTGDKSTAIDSYTFLVNWLQRFPHYKTRDLYITGESYAGHYIPQLAHTILSYNKLTNHTLINLKGIAIGNGWIDDNMCTKGMYDYFWTHGLNSDETNEGIQRHCDFENGNITSECNKYQNRGEEEIGSIDIYDIYAPPCDSTATKPGASPDRNFDPCSDNYISSYLNLAEVQEALHAKASEWSPCRGVGWTDSPATILPTISRGDTDGRVPITSSRYSVNALKLPVETKWRPWYSGNEVGGYLVGYKGLTLVTVRGAGHMVPSYQPQRALTMISFFLRGQLPPDLTTS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3835g00002 480 Pfam Serine carboxypeptidase 84 470 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 79 458 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 ProSitePatterns Serine carboxypeptidases, histidine active site. 441 458 IPR033124 GO:0004185
Mupr3835g00002 480 FunFam Carboxypeptidase 74 333 - -
Mupr3835g00002 480 SUPERFAMILY alpha/beta-Hydrolases 80 472 IPR029058 -
Mupr3835g00002 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Mupr3835g00002 480 Gene3D - 387 471 - -
Mupr3835g00002 480 FunFam Carboxypeptidase 387 471 - -
Mupr3835g00002 480 Gene3D alpha/beta hydrolase 73 340 IPR029058 -
Mupr3835g00002 480 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mupr3835g00002 480 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Mupr3835g00002 480 Gene3D - 349 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3835g00002 Mupr-Chr3835 11923 17219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3835g00002 393 472 Calmodulin-binding Proteins AT2G22960 32.099 1.81e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3835g00002 K16297 - gmx:100818983 848.966