Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr382g00005 ATGAACAATCCTGTAGATGAAAGGGAGCAGTGTCAAAAGAAGAGGAAATCTACCATATGTGAAGCCTCTACCTTTAGGTCATCAAGGAGAAGATTTTGCAACAACAAGAATGAAGAGGAGATGAGCAAAGGAGTTTCAACAACATTGAAGCTTTATGATGACCCATGGAAGATCAAGAAGACTCTAACTGATAGTGATTTGGGAATCCTAAGTAGACTCTTGTTGGCTGCAGATTTGGTTAAGAAACAAATTTTGCCTATGTTGGGTGCAGATTATGCAAGAGCCGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAACTCGTTCTAAAACGATGGTCTTCATCCAAGAGCTATGTTTTTATTGGAAAGTGGAACCAAGATTTCGTGAGAAGAAGAGATCTAAAGAAAGATGGAGTCCTCCTGGTTTCTATATTAATTTAA 471 0.3992 MNNPVDEREQCQKKRKSTICEASTFRSSRRRFCNNKNEEEMSKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGADYARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVFIGKWNQDFVRRRDLKKDGVLLVSILI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr382g00005 156 SUPERFAMILY DNA-binding pseudobarrel domain 54 151 IPR015300 -
Mupr382g00005 156 CDD B3_DNA 56 145 IPR003340 GO:0003677
Mupr382g00005 156 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 27 147 - -
Mupr382g00005 156 Gene3D - 55 154 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr382g00005 Mupr-Chr382 28890 29593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr382g00005 58 150 RAV Transcription Factor Family AT1G50680 35.000 1.22e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr382g00005 - - pvu:PHAVU_009G204600g 274.248