Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3824g00006 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTCTTGGCTGTTGATGACAGCCTCATAGATAGGAAGCTCATTGAGAGGCTCCTCAAAACCTCTTCCTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAGTGATGAGAGCAACCTAAGTACACCTTCTGTTTCTCCGAACAATCATCATCAAGAGGTGGAGGTGAATCTTGTTATTACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTGCAAGGATTAACAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTGAACAGGCTTAAACCCCATATGAAGAAGACCAAGTTGAAAGATGAAAAGCATGAAACAGCAGAAAAGCTTGAAATCTTAGAAGTTCAACAACAAATCCAAAATGAACAGCAGCATCAAGCACAACAATCCCTAGATCTTCCTCAGCCAGAGTCAGAGTCACATCCACAACCAACTATTGAACAACAGCAACAATCACTTCAACAAGCCAATAGTAACAAGAGGAAGACCATTGAACAGGGGCTTTCCCCTGAAACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 717 0.4268 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRESDESNLSTPSVSPNNHHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDLNRLKPHMKKTKLKDEKHETAEKLEILEVQQQIQNEQQHQAQQSLDLPQPESESHPQPTIEQQQQSLQQANSNKRKTIEQGLSPETDRTRPRYSGIATVV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3824g00006 238 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Mupr3824g00006 238 Coils Coil 198 218 - -
Mupr3824g00006 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 203 IPR045279 GO:0009736
Mupr3824g00006 238 MobiDBLite consensus disorder prediction 171 238 - -
Mupr3824g00006 238 Coils Coil 148 168 - -
Mupr3824g00006 238 SUPERFAMILY CheY-like 8 175 IPR011006 -
Mupr3824g00006 238 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Mupr3824g00006 238 MobiDBLite consensus disorder prediction 171 217 - -
Mupr3824g00006 238 Gene3D - 10 228 - -
Mupr3824g00006 238 CDD REC_typeA_ARR 11 142 - -
Mupr3824g00006 238 SMART REC_2 9 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3824g00006 Mupr-Chr3824 104036 105515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3824g00006 1 238 Response Regulator Gene Family AT3G57040 61.600 2.66e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr3824g00006 Response_reg 1.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3824g00006 K14492 - gmx:100814494 352.829