Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3822g00002 ATGAAATCCAAGAAGAGAGGACGTGAGACTTTAGATGCCATGCAAACCATGACGAATGAGGGAAACAGCCTCCCCTTTGCGTGCATGGGAGGGGCTCCTCCGACAAGCATTCATTCGCCACGTAACACAATGGGAAGGTCCCCATGCTGCGATGAGAATGGCCTTAAGAAAGGTCCTTGGACTCCCGAAGAAGATCAAAAGCTAGTCCAGCACATTCAGAAACATGGCCATGGAAGTTGGAGAGCTCTCCCTAAGCTAGCCGGTCTTAACAGATGTGGAAAAAGTTGTAGGCTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGAGGGGGAAATTTTCTCAAGAAGAGGAGCAGACAATTCTGCATCTCCATTCCATCCTTGGAAACAAATGGTCAGCAATTGCAACCCACCTTCCAGGCAGGACGGACAATGAGATAAAGAATTTCTGGAATACTCATTTAAAGAAAAAGTTGATTCAGATGGGTTTTGATCCAATGACTCACCAGCCTAGAACTGACCTTGTTTCCAGCCTGCCATATCTGCTAGCTTTGGCCAACATGACAGACCTTATTGAGCATCAGTCATTGGATGAACATGCTGTGAGGTTACAAGAAGAGACAGTCCAGCTAGCAAAGCTTCAATACCTTCATTATCTAATCCAATCCTCAAACTCCTTAAGCACCAACTCCTATGACCAGAATGCCACCATGGAACCTTTGAGTTTGTTATACTCAATCTCCAATGTGAAAGAGAATCCAGTCATATTGCAACCAGATACTCCTGCCTCATTTTCTCATGGCATTGCTAGTTCTCAACCACTCCACCACCCAAGTGTGCTACTACCTCACCTTTTAGACCCACAAGTCTCTTTCACTTCTCAATCATGTTTGAATAGTGAGATGGGTCAAGGTACTAACTTTGCAATGATAAGTCAAGGGGATCACACGCTTGATCATGACTCTTCCTGGATTATTCCATCTATTCCTCCGAATGCAATTGGGACCACAGCTAATAACAATCCAGGAGATGCCAGCAGCACCACTTCTAGCTATGGAGGAGGACCCTCATCTTATTGGTCTGAACTATTTTTTGAGGACCCCATTATGCATGACCTATCTTAG 1125 0.4471 MKSKKRGRETLDAMQTMTNEGNSLPFACMGGAPPTSIHSPRNTMGRSPCCDENGLKKGPWTPEEDQKLVQHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTDLIEHQSLDEHAVRLQEETVQLAKLQYLHYLIQSSNSLSTNSYDQNATMEPLSLLYSISNVKENPVILQPDTPASFSHGIASSQPLHHPSVLLPHLLDPQVSFTSQSCLNSEMGQGTNFAMISQGDHTLDHDSSWIIPSIPPNAIGTTANNNPGDASSTTSSYGGGPSSYWSELFFEDPIMHDLS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3822g00002 374 Gene3D - 112 159 - -
Mupr3822g00002 374 ProSiteProfiles Myb-like domain profile. 105 155 IPR001005 -
Mupr3822g00002 374 MobiDBLite consensus disorder prediction 330 353 - -
Mupr3822g00002 374 FunFam Transcription factor MYB39 112 173 - -
Mupr3822g00002 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 159 IPR017930 -
Mupr3822g00002 374 CDD SANT 59 104 IPR001005 -
Mupr3822g00002 374 ProSiteProfiles Myb-like domain profile. 52 104 IPR001005 -
Mupr3822g00002 374 SUPERFAMILY Homeodomain-like 54 151 IPR009057 -
Mupr3822g00002 374 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
Mupr3822g00002 374 Pfam Myb-like DNA-binding domain 57 104 IPR001005 -
Mupr3822g00002 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 104 IPR017930 -
Mupr3822g00002 374 CDD SANT 112 155 IPR001005 -
Mupr3822g00002 374 Gene3D - 56 109 - -
Mupr3822g00002 374 FunFam MYB-related transcription factor 56 109 - -
Mupr3822g00002 374 Coils Coil 370 374 - -
Mupr3822g00002 374 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 44 235 - -
Mupr3822g00002 374 SMART sant 109 157 IPR001005 -
Mupr3822g00002 374 SMART sant 56 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3822g00002 Mupr-Chr3822 9185 11690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3822g00002 44 374 MYB Transcription Factor Family AT1G34670 54.960 9.55e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr3822g00002 Myb_DNA-binding 6.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3822g00002 K09422 - gmx:100811162 585.489