Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr3820g00009 | AAAAAGAGAGAAAAATATATACACTATTCTGCTAAGGGCTGGAACCTGCTCTCCTGTCCTGCATATAACTTCTCCACTTTGTTTCCTCACCAGGGTGAAGAGGCTGTTCCAAACTTCCATTTGTTCTTTCTTTTTGAGATTCTTCCTAACCTGACAAAAACAGCTCAAAGAACAAAATTTACCTATGAAAATAGAATGATGATCTTTTCCTTGATTCAGCTTGCAAGCATGGCTTTTCCAAACCAATCGACGTCATCAGTTTCTCCCCAGAGAAAGATGGGAAGGGGGAAGATTGAGATCAAGCGGATTGAGAACACCACCAATCGTCAAGTTACCTTCTGCAAGCGCAGAAATGGCTTGCTCAAGAAGGCATATGAGTTATCTGTGCTTTGTGATGCAGAGGTTGCTCTAATAGTCTTTTCAAGCCGTGGCCGCCTCTATGAATATGCTAATAACAGCGTGAAAGCTTCAATTGAGAGGTACAAGAAAGCAAGTTCAGACTCATCTAGTGGTGGATCTACTTCTGAGGCTAATGCTCAGAAGCTGCCAAACTACGAGCAAATGATGGGTGAGGCTCTGAGCACTATGAATGCCAAGGATCTCAAAAACCTTGAGACTAAACTAGAGAAAGGAATTAGCAGAATTCGTTCCAAGAAGGAGATAGACTTGCACAATAGCAACCAGCTTCTTAGAGCAAAGATAGCAGAAAATGATAGGAGTGAGCATAATATTAACGTGTTGTCCGGAAGCACAAGCTACGAATCGATGCAATCTCAGTTTGAGTCTCGTGGCTTCTTCCAAGTGACTGGATTACAACCCAATAATAATCAGTATGCCGGCCAAGACCACATGTCCCTTCAATTT | 864 | 0.4225 | KKREKYIHYSAKGWNLLSCPAYNFSTLFPHQGEEAVPNFHLFFLFEILPNLTKTAQRTKFTYENRMMIFSLIQLASMAFPNQSTSSVSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKASIERYKKASSDSSSGGSTSEANAQKLPNYEQMMGEALSTMNAKDLKNLETKLEKGISRIRSKKEIDLHNSNQLLRAKIAENDRSEHNINVLSGSTSYESMQSQFESRGFFQVTGLQPNNNQYAGQDHMSLQF | 288 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr3820g00009 | 288 | Pfam | K-box region | 186 | 244 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Mupr3820g00009 | 288 | SUPERFAMILY | SRF-like | 94 | 166 | IPR036879 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | CDD | MADS_MEF2_like | 94 | 163 | IPR033896 | GO:0000977|GO:0045944 | |
Mupr3820g00009 | 288 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 93 | 245 | - | - | |
Mupr3820g00009 | 288 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 102 | 149 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | ProSiteProfiles | MADS-box domain profile. | 93 | 153 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | FunFam | MADS-box transcription factor 21 | 105 | 171 | - | - | |
Mupr3820g00009 | 288 | Gene3D | - | 105 | 182 | IPR036879 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | MobiDBLite | consensus disorder prediction | 164 | 182 | - | - | |
Mupr3820g00009 | 288 | MobiDBLite | consensus disorder prediction | 164 | 183 | - | - | |
Mupr3820g00009 | 288 | PRINTS | MADS domain signature | 95 | 115 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | PRINTS | MADS domain signature | 130 | 151 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | PRINTS | MADS domain signature | 115 | 130 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | ProSitePatterns | MADS-box domain signature. | 95 | 149 | IPR002100 | GO:0003677|GO:0046983 | |
Mupr3820g00009 | 288 | SMART | madsneu2 | 93 | 152 | IPR002100 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr3820g00009 | Mupr-Chr3820 | 72266 | 78463 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr3820g00009 | 83 | 288 | MADS-box Gene Family | AT3G58780 | 52.033 | 1.17e-72 | 222 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MADS-MIKC | Mupr3820g00009 | K-box | 1.2e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr3820g00009 | K09264 | - | gmx:100800107 | 329.331 |