Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3820g00004 ATGTATGCAAGTGGACTGGAGGGACCTATTCCATCAAATATCTCTCTTTTGAGTAATTTAAATCAGTTGGAGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCTATTTTAGGCAACATGAAAGGAATGACGATATTGGTTTTGAGAAATTGTCACATTACTGGAGAGCTTCCTAGCTACTTCTGGAGTATGAAGAGTTTGAATATGTTGGACGTCAGTTTCAATAAGTTGGTTGGAGAAATACCAGTAGCTGCACATGCAGGGCATACAAGATTTCTCTTCCTAACTAGAAACATGCTAAGTGGAAATATACCTGACTCAGTCTTGATGGATGGAAGCAATTCACATTGTTTTCATGTTAATTGTGGTGGAGAGGATGTAAAGGTGATGGAAAATGATGAAAATATTCTCTATGTAGGAGATGGAAATGTGTTAGGTAGTGCTGCTGCTAAATATTTTATTAATTATGAAAATCACTGGGGATTTAGCAGCACTGGGGACTTCATGGATGATGGTGACTACCTAAATACACGTTACACTAGGCCTTCGCCATCTTCAAATTTGCCTGAATTATATAAAACGGCTCGTGTTACTCCAATTTCGCTTACTTATTTTCACTATTGCTTGGAAAATGGGAAATACACTGTAAATCTCCACTTTGCAGAAATACAATTTACAAACGATAACACATTTAGAAGTCTTGGGAAGCGCATATTTGATATTTATGTTCAGGAAATATTAGTTAGGAAAGATTTTAACATTGAAAGTGAAACGCATGTTGCTCAAAAACCACTTACAATCCCAATATATAATGTCACTGTAACAGACAATATTCTGGAGGTTCAATTCTATTGGGCTGGCAAGGGGACTACAAGGATTCCTACTAGTGGAGTTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTGATTCTAAACCTTGTTCAGACCCAAAAAATGTAAGACATAAGATAATCGTTGGAGCTGGATTTGGAGTCACAGCTCTATGCCTTGTCATTATCATAGTTGGAATCTTTTGGTGGAAGGGCTACTTCGAAGGAATAATTAGGAGAACAAAAGGTAATAAAAAGCAAGATTCTCAGAAGGGGACATTTACATTAAAACAAATTAGAGACGCCACAGATGATTTCAGTCCTGCTAACATGATTGGAGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGATGGTACATTGGTAGCAGTCAAACAACTCTCATCAATGTCACGGCAGGGAAACCGTGAATTTTTAAATGAGATAGGCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATGTTGCATTGAAGGGAAACAGTTGATGTTGGTGTATGAGTACATGGAAAATAATAACCTAGCTCGCTCTTTATTCAGCTCAAAAAATCAACTCAAACTCGATTGGCCAACAAGGCTTAGGATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTTCATGAAGAATCAAGACTCAAGATTGTTCATCGAGACATCAAAGCTACTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGATAAGAGCCATATCATCACCCGAGTAGCTGGGACAATAGGGTACATGGCACCAGAATATGCATTATGGGGCTACCTGTCTTACAAGGCTGATGTTTACAGTTATGGGGTTGTGGTCTTGGAAGTTGTTAGTGGGAAGAACAATAACAATTACACGCCAAGTGATAACTGTGTTTGCCTTTTAGACATGGCATGTCATCTGCAGCGTACAGAAAACTTAATAGAGCTGGTTGATGAAAGGTTGGGATCAGAGGTAAACCCAACTGAAGCAACAAATTTGATGAAAGTAGCTCTCTTGTGCACCGATGTATCGCCTTCGGTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGGAAGAATGAGCATTCCAGATGCTATCCCACAACCAAGTGATTTTAGTGAAGATATAAGGTTTAAAGCCATGAGGGACATCCATCAACAAAGGGAAAATCACAGTTTGAGCACTAGCCGAACAGAC 2094 0.3892 MYASGLEGPIPSNISLLSNLNQLEISDINGPSQDFPILGNMKGMTILVLRNCHITGELPSYFWSMKSLNMLDVSFNKLVGEIPVAAHAGHTRFLFLTRNMLSGNIPDSVLMDGSNSHCFHVNCGGEDVKVMENDENILYVGDGNVLGSAAAKYFINYENHWGFSSTGDFMDDGDYLNTRYTRPSPSSNLPELYKTARVTPISLTYFHYCLENGKYTVNLHFAEIQFTNDNTFRSLGKRIFDIYVQEILVRKDFNIESETHVAQKPLTIPIYNVTVTDNILEVQFYWAGKGTTRIPTSGVYGPLISAFSIVSDSKPCSDPKNVRHKIIVGAGFGVTALCLVIIIVGIFWWKGYFEGIIRRTKGNKKQDSQKGTFTLKQIRDATDDFSPANMIGEGGFGPVYKGQLSDGTLVAVKQLSSMSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGKQLMLVYEYMENNNLARSLFSSKNQLKLDWPTRLRICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLARLDEEDKSHIITRVAGTIGYMAPEYALWGYLSYKADVYSYGVVVLEVVSGKNNNNYTPSDNCVCLLDMACHLQRTENLIELVDERLGSEVNPTEATNLMKVALLCTDVSPSVRPTMSEVVNMLEGRMSIPDAIPQPSDFSEDIRFKAMRDIHQQRENHSLSTSRTD 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3820g00004 698 SUPERFAMILY L domain-like 4 108 - -
Mupr3820g00004 698 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 690 - -
Mupr3820g00004 698 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 116 312 - -
Mupr3820g00004 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Mupr3820g00004 698 Gene3D Transferase(Phosphotransferase) domain 1 461 664 - -
Mupr3820g00004 698 Gene3D Phosphorylase Kinase; domain 1 355 460 - -
Mupr3820g00004 698 Pfam Malectin domain 118 307 IPR021720 -
Mupr3820g00004 698 ProSiteProfiles Protein kinase domain profile. 385 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3820g00004 698 Gene3D - 119 314 - -
Mupr3820g00004 698 SMART serkin_6 385 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3820g00004 698 Gene3D Ribonuclease Inhibitor 1 118 IPR032675 -
Mupr3820g00004 698 CDD STKc_IRAK 391 657 - -
Mupr3820g00004 698 FunFam Putative LRR receptor-like serine/threonine-protein kinase 461 667 - -
Mupr3820g00004 698 Pfam Protein tyrosine and serine/threonine kinase 389 655 IPR001245 GO:0004672|GO:0006468
Mupr3820g00004 698 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 356 460 - -
Mupr3820g00004 698 SUPERFAMILY Protein kinase-like (PK-like) 370 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3820g00004 Mupr-Chr3820 17792 25599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3820g00004 1 550 Receptor kinase-like Gene Family AT1G29750 56.198 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr3820g00004 PK_Tyr_Ser-Thr 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3820g00004 - - lja:Lj4g3v2618570.1 1072.77