Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr380g00011 ATGGCTGTTGCTGGTTTACACAGTGTGTCTGTGCTTGACTCTTCTTTCCTGAGGGATTCCCTTCCTCAGTCCTCTGGGAGAGGGGGAGAGGGAAGAAGGGGAGGCACCCGGTCGTCTTCACTCTTGCAAATGTGGCGAGAGATTGAAGATGAACATGTGGTGAATCACGTTCAAGGAAGATCTGGTGAAGTACCTCTTGAACAGAGGAGAGATGGGTTGATTGCAGCCCTTTCACAGGATGATAGACTGGGTATCCAAGAGAGAGGGCATGGGGATATTATAGAATTGGGTGAGAATGAATCTGAAACATGGTCACAGTCACAAAGTCAAATTGAATCCCATGATGAACATGAAGATTTAAACAATTCTAGCTGTGAAAACTCTTCTGACTTGGGAGAAGTTGAAAGGGAAAGAGTGAGGCAAGTTTTCAGGGAATGGAAGAATAGTGGAGCTAGGGGCCATGTATCAAACAATTCTGGAAGAAATAATGGTTCCAGGGGAGAATGGCTTGGGGAAACTGAGCAGGAAAGGGTGAGAATTATTAGGGAGTGGGTACAAATGAGTAGCCAGCAGAGAAGTGTCTCTTCTGGGGAAAACAGGGAAGAACCTTCTGCTGAAATTGATACACGAATTGAACGTGTACGTGATGGACTCGTTGTTAATCAGATTGGGAGCCAAACTGAGCATACAAGGAGAGGCATACGTAAATTATGTGGCCGACAGGCTATACTTGATATGCTTAAGAAGGCTGAGAGAGAAAGGCAAAGTGAAATTCAGGAGTTGTTGGACCTTCGGGCCGTATCACAATTTCCCTATCGCAATCGTATTCAGGCACTGCTTAGAGGCAGATTCTTGAGAAATGATAGATCTGTTGATAATAACAAGCCCCTTTCTGTTGCAGAAAGTGAATTGGGTTTCTTGAGGCGAAGACAAACTGTATCAGGTCTGAGGGAAGGATTTTTCTCTAGAAAGGAGAATAGTGGCTGCAGTCAAGCAACCAGTATTGTATCTGATACCTCATCTAATGTTGATATTGATTTTAATACAAATGAGCAAACAGAATCAAGCAGTTCACACATGGTCCCAAGTTTACATTCTGAACAGTCCGACCCTAATGACAGAGGAAGCAATGAACTTGGGGTATCAGGCAGCCAGAACTGTTTACAAGGAACCACATGTGAGAATTTAGATTGGCAAGACCCTACTGCACAAGTAGAAGGAGATCAATTGCAGCATTTGCAGCATTTGCCAATTGAATCATTAGATCTGCAATCATCATTCAACACCGAGCTAAATGTTGATGGGATGCCACCTGAAGATACTGCTAATGAACATACCCAACAAAGCTCGAGAATTGAAGATTCAGAGCATAGTAATAATCAGGAATTCAGCGAGGTGCATAATGAGCAGTCTGAGCTGGGTGATATAAATAATGGTGAAAACAATTCTTCAAATCACAACAATCATATAGAGGGTAATGTTGATGATGTAAATTGGAATGAATCTGGTGCTCTAGAAGGAGAACAGCCAGTAGAAATTTTTGAAAATGAAGGCAGTGAGTGGTATCAGAGTAATACGGAATGGAGAAATAGCACTGAGGAAAATGTGGATGATAATCAGCTCAGTAATACAGCAAATGAGTGGCCTGAAAACGGTTTGGGAAATGAGGATGGAGAACACTCTCGTCTGCAAGAATCTCATGAAGTGTGGCATGAAGATGGTGGCTTCCAAGAGGCTGTGGAAAATTGGTTGGGAGGACCATCTGATCATGAAAGTGCTCCAGTTGGTAGAATTCGTGGATTTTATTTTCCTGAAGATGATAATGTGTACAGTGTTGAACTCAGGGAACTTCTTAATAGGAGAAGTGTCTCTAACCTCCTTCGCAGCAGTTTCCGTGATAGTCTTGATCAGTTGATACAGTCTTATGTTGAAAGGCAAAGTCATGCTAACATTGACTGGGAGCTGCAAGAAACAACCCCTTCTTCTGCCTCAGTAGAGCAGGACCTTGAGCAGCAGAGTAGGGATCAAATTGTTGGCCAGGAGGGTACTGTTAATAGTCCACTTGACCTGCCCTCTTTACCTATACCGCCTCCTCTGCCTCTTTGGGACCAGCACCCCCATCGTGACAACTGGTCACAGAATGACATAAATAATCAGCGTCTAGGAATTGATTGGGAGATTGTTAATGACTTGAGAATTGACATGGCTCGATTACAGCAAAGGATGAATAACATGCAGAGAATGCTGGAGGCTTGTATGGATATGCAGCTTGAGTTGCAGCGCTCTATAAGACAAGAAGTTTCTGCAGCCCTAAATCGCTCTGGTGGTTCAACAGGAATACACGACTGCGAGTCACCAGAAGATAAATCTAAATGGGAATGTGTGAGAAAAGGACTTTGCTGTATATGCTGCGAAAGCAATATCGATTCTTTGTTGTACAGATGTGGGCATTTGTGTACATGTTCAAAATGTGCCAATGAGTTGCTCCAAAGCAGAAGGAAGTGCCCAATGTGTCAAGCTCCTGTGGTGGAGTTCTAA 2538 0.4338 MAVAGLHSVSVLDSSFLRDSLPQSSGRGGEGRRGGTRSSSLLQMWREIEDEHVVNHVQGRSGEVPLEQRRDGLIAALSQDDRLGIQERGHGDIIELGENESETWSQSQSQIESHDEHEDLNNSSCENSSDLGEVERERVRQVFREWKNSGARGHVSNNSGRNNGSRGEWLGETEQERVRIIREWVQMSSQQRSVSSGENREEPSAEIDTRIERVRDGLVVNQIGSQTEHTRRGIRKLCGRQAILDMLKKAERERQSEIQELLDLRAVSQFPYRNRIQALLRGRFLRNDRSVDNNKPLSVAESELGFLRRRQTVSGLREGFFSRKENSGCSQATSIVSDTSSNVDIDFNTNEQTESSSSHMVPSLHSEQSDPNDRGSNELGVSGSQNCLQGTTCENLDWQDPTAQVEGDQLQHLQHLPIESLDLQSSFNTELNVDGMPPEDTANEHTQQSSRIEDSEHSNNQEFSEVHNEQSELGDINNGENNSSNHNNHIEGNVDDVNWNESGALEGEQPVEIFENEGSEWYQSNTEWRNSTEENVDDNQLSNTANEWPENGLGNEDGEHSRLQESHEVWHEDGGFQEAVENWLGGPSDHESAPVGRIRGFYFPEDDNVYSVELRELLNRRSVSNLLRSSFRDSLDQLIQSYVERQSHANIDWELQETTPSSASVEQDLEQQSRDQIVGQEGTVNSPLDLPSLPIPPPLPLWDQHPHRDNWSQNDINNQRLGIDWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSGGSTGIHDCESPEDKSKWECVRKGLCCICCESNIDSLLYRCGHLCTCSKCANELLQSRRKCPMCQAPVVEF 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr380g00011 845 Coils Coil 728 755 - -
Mupr380g00011 845 ProSiteProfiles Zinc finger RING-type profile. 800 839 IPR001841 -
Mupr380g00011 845 CDD mRING-HC-C3HC5_NEU1 800 844 - -
Mupr380g00011 845 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 440 844 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 95 134 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 464 495 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 150 170 - -
Mupr380g00011 845 SUPERFAMILY RING/U-box 799 844 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 446 463 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 151 169 - -
Mupr380g00011 845 Pfam Zinc finger, C3HC4 type (RING finger) 797 842 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 342 383 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 18 38 - -
Mupr380g00011 845 Coils Coil 240 267 - -
Mupr380g00011 845 MobiDBLite consensus disorder prediction 429 501 - -
Mupr380g00011 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 784 845 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr380g00011 Mupr-Chr380 46407 51306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr380g00011 800 845 C3H Transcription Factor Family AT3G06140 43.478 3.37e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr380g00011 - - gmx:100801329 1388.63