Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr380g00002 ATGGGTCAGATCCAGTACTCCGAGAAGTATTTCGACGATACTTATGAATACAGACACGTGGTTCTGCCTCCTGAAGTAGCCAAAATGCTTCCCAAGAATCGCCTTCTCTCCGAAAATGAGTGGAGGGCAATTGGGGTTCAGCAGAGTCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCTCACATAATGCTTTTCAGGAGGCCTTTGAATTATCAGCAGCAGCAGGAAAACCAGGCCCAGCAAAGCATGCTTAGTGTGCTGTTTCCCTACTGTGCAACATAG 288 0.4792 MGQIQYSEKYFDDTYEYRHVVLPPEVAKMLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQSMLSVLFPYCAT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr380g00002 95 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Mupr380g00002 95 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Mupr380g00002 95 Gene3D - 1 84 IPR036858 GO:0016538
Mupr380g00002 95 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Mupr380g00002 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Mupr380g00002 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Mupr380g00002 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Mupr380g00002 95 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Mupr380g00002 95 SMART CKS_2 3 72 IPR000789 GO:0016538
Mupr380g00002 95 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 84 - -
Mupr380g00002 95 FunFam Cyclin-dependent kinases regulatory subunit 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr380g00002 Mupr-Chr380 5051 6616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr380g00002 1 82 Core Cell Cycle Gene Families AT2G27970 90.244 2.48e-52 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr380g00002 K02219 - gmx:100786340 175.637