Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3805g00003 ATGGGAATCGACGATGGCAGGGAAATCGAAGCTAAAGACTACGCGCTCAGCGGCAAGATAATGGTAATCGCCATTGCCGTTCTCTTCGTTGTCATCCTTATAATGCTCTGCCTCCACGTCTACGTCCGGTGGCGCCTGGTACGCGCTCGCCGCCGGCAACCCCTACACCGCAGTGGCCGCCCGCAGTTTGTGTTCTACGTGGACCCCGCCGCCCGCATTGCCCGCACCACGCGCGGCCTCCACCGCTCCATCATCTCCACGCTCCCCGTCTTCACGTTCTCCCCTGCGACCCCCCCGATGGAATGCGCGGTGTGCCTGTCGGAGTTCAAGAACGGGGAAACGGGTCGGGTCTTGCCCAAATGCAACCACAGTTTTCATACCGACTGCATCGACATGTGGTTCCGGTCCCACGCCACGTGTCCGCTTTGTAGGGCGCCCGTTGAGGCCCAATCCGACCCAGAGGCCCGGCCCGAGGAGACTGTTATCGTGAGTGAGCCCGAACCGGTTCGGGAAGAGGTGAACCGGTCTGGATCGGAGGGTGGTTCTTCCTCTTCTTCGTTGTCGGTGAGTCGGATACTGTCGTTTAAGAGGATTCTGAGCAGAGAGAAGGGAAGCGTTTCGGGGTGTGTGGGGGTAGGAGGGTGCAGCACCATGACCGAGTTAGACGCGGAACGTGGAGAGTGTGACTCGCTGAGTTGA 699 0.6037 MGIDDGREIEAKDYALSGKIMVIAIAVLFVVILIMLCLHVYVRWRLVRARRRQPLHRSGRPQFVFYVDPAARIARTTRGLHRSIISTLPVFTFSPATPPMECAVCLSEFKNGETGRVLPKCNHSFHTDCIDMWFRSHATCPLCRAPVEAQSDPEARPEETVIVSEPEPVREEVNRSGSEGGSSSSSLSVSRILSFKRILSREKGSVSGCVGVGGCSTMTELDAERGECDSLS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3805g00003 232 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Mupr3805g00003 232 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 19 167 - -
Mupr3805g00003 232 SMART ring_2 102 143 IPR001841 -
Mupr3805g00003 232 MobiDBLite consensus disorder prediction 151 174 - -
Mupr3805g00003 232 FunFam E3 ubiquitin-protein ligase ATL6 69 150 - -
Mupr3805g00003 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 150 IPR013083 -
Mupr3805g00003 232 CDD RING-H2_EL5-like 101 144 - -
Mupr3805g00003 232 MobiDBLite consensus disorder prediction 151 186 - -
Mupr3805g00003 232 SUPERFAMILY RING/U-box 98 151 - -
Mupr3805g00003 232 Pfam Ring finger domain 101 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3805g00003 Mupr-Chr3805 15266 15964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3805g00003 4 226 Rapid Response to Elicitors AT3G16720 40.909 3.27e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3805g00003 - - gmx:100800859 280.796