Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3805g00002 ATGGCTGATGGATTCGATAGCGTCCACGAGAAGAAGAAGAAGCTCGCCGTGCTGAGCGTGTCTTCCCTCCTTTTGGTGGCGATGGTGGCCGCGGTGGCTGTCGGAATAAATGATAGAGGCTCCGCCGAGATCGGCATGGAAGAGAACGATGGCGAGATAGTGAAAAGTCAAAGGAACATGCAGGTGATATGCGAGAACACTGAATACAAAGAAACGTGCCACAAGAGTCTCGAGAAAGCCTCAAATGAAACTACCGACTTCAAGGAGCTTATCATAACCGCGTTCAACGCGACGGCCGAGGAGATAAAAAGCCAAATGCATAACTCAACGCTGTACCACGTGTTGGCCACCGACAACATGACCAAACAGGCCATGGAAATTTGCAAGGAGGTCCTAGGTTACGCGGTGGATGATATTCACCAATCCGTTCAAATGTTGGACAAGTTCAACCTAAGCAAAATGAGCGAGTACGCGTACGACCTCAAGGTGTGGCTCGCGGGTACCCTTGCCCACCAACAAACATGCTTGGAGGGGTTTGAGGAATCGAACACCGAAGCCGGCAAGACCATGACGAAGGTTCTGAACGCGTCGTTGGAGCTCAGCAACAACGCGTTGGACATAGTGAACGGCGTGGCGAGTCTCTTCAAGGGTCTTAACCTGAGTTCGTTCACCACCAGCAGAAAGATTCTCTCGGACGCGCCCTTCCCTTCGTGGGTGAATGAAGGGCAGAAGAGGATCCTCGAGGGTGCTGACCCCAAACCCGACGTTGTTGTCGCTCAGGATGGGTCTGGACAGGTCAAGAAAATCCACGAGGCTCTTAAACTCGTTCCCAAAAAGAATAAAAAGCAGTTTGTCATTTTCATCAAGGCCGGTGTCTATGAGGAGTATATTATCTTGAACAAGCACATGACCTATGTCACCATGATCGGAGAAGGCCCCACCAAGACAAGAATCACCGGCAACAAAAACTACGTCGACGGCGTCCAAACTTACAACAGCGCCACCGTCGGTGTGAACGCTGCTAACTTCATGGCGAAAAACATTGGGTTCGAGAACTCGGCCGGAGCAGAGAAGCACCAAGCGGTGGCCCTTCGCGTAACGGCAGACAAGGCGGTGTTTTACAACTGCCACATGGACGGGTACCAAGATACCCTTTATGTGCAATCACAGAGGCAATTCTACCGCGACTGCACAGTGTCGGGAACAATCGACTTCGTGTTCGGGGACGCTATCGGCGTGTTCCAGAATTGCAAGTTCATCGTGAGGAAGCCACTGGAGGATCAGCAGTGCATGGTGACGGCAGGGGGGAGGTCGAAGGCGGACAGTCCTACCGGGCTGGTGTTCCAGAGCTGCACGTTCACTGGCGAGCCAGAGGTGATGGGAATGAACCCCAAGATCGCTTACTTGGGAAGGCCGTGGAGAATGTTCTCCAAGGTTGTGATCATGGACTCCCAAATCGACGACCTTTTTCTTCCTGAAGGGTACATGGCGTGGATGGGAAGTGCCTACAAGGACACTAGCACCTACTACGAGTTCAACAACAGGGGTCCCGGTGCTGTCACTAATGGTAGAATCTCATGGCCTGGTTTCAAGGTCGTTGATCATTCAGAGGCTGCTGATTACTACCCTGGAAAGTTCTTCGAGATCGCCAATTCCACTGACCGCGATGCTTGGATCCTCGACTCTGGGGTACCCTACTCCCTTGGCCCCATTCCCCTTTAA 1722 0.5238 MADGFDSVHEKKKKLAVLSVSSLLLVAMVAAVAVGINDRGSAEIGMEENDGEIVKSQRNMQVICENTEYKETCHKSLEKASNETTDFKELIITAFNATAEEIKSQMHNSTLYHVLATDNMTKQAMEICKEVLGYAVDDIHQSVQMLDKFNLSKMSEYAYDLKVWLAGTLAHQQTCLEGFEESNTEAGKTMTKVLNASLELSNNALDIVNGVASLFKGLNLSSFTTSRKILSDAPFPSWVNEGQKRILEGADPKPDVVVAQDGSGQVKKIHEALKLVPKKNKKQFVIFIKAGVYEEYIILNKHMTYVTMIGEGPTKTRITGNKNYVDGVQTYNSATVGVNAANFMAKNIGFENSAGAEKHQAVALRVTADKAVFYNCHMDGYQDTLYVQSQRQFYRDCTVSGTIDFVFGDAIGVFQNCKFIVRKPLEDQQCMVTAGGRSKADSPTGLVFQSCTFTGEPEVMGMNPKIAYLGRPWRMFSKVVIMDSQIDDLFLPEGYMAWMGSAYKDTSTYYEFNNRGPGAVTNGRISWPGFKVVDHSEAADYYPGKFFEIANSTDRDAWILDSGVPYSLGPIPL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3805g00002 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 211 IPR035513 -
Mupr3805g00002 573 FunFam Pectinesterase 4 252 570 - -
Mupr3805g00002 573 SMART PMEI_2 55 207 IPR006501 GO:0004857
Mupr3805g00002 573 CDD PMEI-like_3 63 213 - -
Mupr3805g00002 573 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Mupr3805g00002 573 Gene3D - 253 570 IPR012334 -
Mupr3805g00002 573 Pfam Pectinesterase 255 547 IPR000070 GO:0030599|GO:0042545
Mupr3805g00002 573 Pfam Plant invertase/pectin methylesterase inhibitor 60 207 IPR006501 GO:0004857
Mupr3805g00002 573 SUPERFAMILY Pectin lyase-like 252 547 IPR011050 -
Mupr3805g00002 573 PANTHER PECTINESTERASE 22 559 - -
Mupr3805g00002 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 209 IPR035513 -
Mupr3805g00002 573 FunFam Pectinesterase 56 212 - -
Mupr3805g00002 573 NCBIfam pectinesterase inhibitor domain 57 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3805g00002 Mupr-Chr3805 2701 4504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3805g00002 1 569 Carbohydrate Esterase AT3G05610 43.206 2.24e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3805g00002 K01051 - gmx:100820068 888.641