Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr379g00005 ATGGAAACAATGGAAGGCTCAAGCAGATATGGAATGTATAGAGCTAAGGGGGAATTTTCTGTTGACTTGAAGCTTGGCCAGGTGGGGAATTCTGCCACGGAATCAATGTTGAATAAGTCCAAAGACGCTGTTGGAGTCTCCAAAATGACATCCTCATCTTCAGGGTCATCTAAGAGAGCTCGTGCCCTTAGCAACGGTACACAAACAGTGTCTTGCCTTGTGGATGGTTGCCATTCTGATCTCAGTAACTGCAGGGACTATCATAGGCGCCATAAGGTCTGTGAAGTCCATTCCAAGACTGCACAGGTCACAATTGGAGGCCAGAAGCAAAGGTTCTGCCAGCAGTGTAGCAGGTTCCATTCACTGGAGGAATTTGATGAGGGAAAAAGAAGCTGCAGGAAGCGGTTAGACGGGCACAACCGACGGAGAAGAAAGCCCCAACCAGAACCTCTAACGCGCTCTGGTGGTTTTTTGTCCAATTACCAAGGCAGCCAGTTGCTACCTTTCTCAAGTTCACATGTATACCCGTCCACTACTGTGGTGAGTCCTGGTTGGGGTGGAGTTATTAGTTCTGGTGATATTAGGCTTCATGGGCACAACCACAACCACAACCACCAACAAGTGCATTTGGTTGATAAACAGGACCTTTTTCTTGGGTCTTCTCCAAGCGGTTATAAAGAAGGGAAGCAGTTGGCATTCATGCAAGGTGAACATACCCTGAACAACCAAAGCCCGCATCTTGCAGGTGGTTCAGTGGGCCAGGCCCAGGTATTTCTTAGGTCGAGCCCGTATTCAGAAAGCGGTGGGATGAGATGCAAAATGTTCTGTGATAGCATAACGAGTTCGGTCCACGACTCCTCCCGTGCTCTCTCTCTTCTGTCATCACCACAGCCGCACAGTCCTGGAAATGGATTAAACCAAATGGTGAACCCTCACTCGCCGCTTATGCAACCCTTGGGCCTCAGCCTGCATGATAACAGCTTGGACCCTGTTTTGGGCCCCCATGGAAGTGACCATTCTTCGTCAATGTATAACATGGGTTCTAATGGATCCCAGGGGAATGAAGCCCCTCCACTCTTTCCCTTTCAATGGGAA 1095 0.4913 METMEGSSRYGMYRAKGEFSVDLKLGQVGNSATESMLNKSKDAVGVSKMTSSSSGSSKRARALSNGTQTVSCLVDGCHSDLSNCRDYHRRHKVCEVHSKTAQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLTRSGGFLSNYQGSQLLPFSSSHVYPSTTVVSPGWGGVISSGDIRLHGHNHNHNHQQVHLVDKQDLFLGSSPSGYKEGKQLAFMQGEHTLNNQSPHLAGGSVGQAQVFLRSSPYSESGGMRCKMFCDSITSSVHDSSRALSLLSSPQPHSPGNGLNQMVNPHSPLMQPLGLSLHDNSLDPVLGPHGSDHSSSMYNMGSNGSQGNEAPPLFPFQWE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr379g00005 365 MobiDBLite consensus disorder prediction 289 313 - -
Mupr379g00005 365 MobiDBLite consensus disorder prediction 289 365 - -
Mupr379g00005 365 MobiDBLite consensus disorder prediction 338 356 - -
Mupr379g00005 365 MobiDBLite consensus disorder prediction 136 157 - -
Mupr379g00005 365 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Mupr379g00005 365 Pfam SBP domain 72 145 IPR004333 GO:0003677
Mupr379g00005 365 SUPERFAMILY SBT domain 70 151 IPR036893 GO:0003677|GO:0005634
Mupr379g00005 365 Gene3D - 63 133 IPR036893 GO:0003677|GO:0005634
Mupr379g00005 365 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Mupr379g00005 365 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 40 354 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr379g00005 Mupr-Chr379 41950 44557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr379g00005 1 365 SBP-box Gene Family AT5G50670 42.632 1.49e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr379g00005 SBP 2.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr379g00005 - - gmx:100806507 612.838