Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3775g00001 ATGACATCAATGGAAGAATCATGGACTAGTTGGCTGTGTGATATGGAACCGGATGATTACAGTTTCATCAGTCAATCAGACATAAAGGTGGATGCTCACAACGATATAGCCACTGCATTAGAAGAGAATCAGCAGAGCACATTTTCCACGGAGAGTTACTCTTCAGTGGTGGCTGAGAGTGGCTTAGAGTTAGAGAGGCCTTTCAAGTTACTCAAGACATGCACTTCAAACAATGCCAAGACAGAGCAACTCCCACAAAAGTCAGCTTCTTCTCCCTGCTCCTACATTCTCTCCTTTGACAACACGAATCCACCAACAACGAAGGTTGAATCAGCCTCCAAGCCAGGAACCAAGGTTGTTACAAATCGTGGGAAAGCTTTGCCTTCAAAGAATGAACCAAGACGCGTTACTCAGGAGAGCAAGAAATTGGGCTCATTGGCCAGATCTTCTCATCACACACAAGATCACATAATTGCTGAGAGAAAGAGGAGAGAAAAGATTAACCAGCAGTTCATAGCTCTTTCAGCCCTAATTCCAGATCTCAAAAAGATGGACAAGGTATCTGTGTTGGGAGACGCTATAAAGTATGTGAAACAGCTGAAGGAGCAAGTGAAAGTGCTGGAGGAGCAGAGCAAAAGGAAAAGCGAGGAATCGGTGTTGTTGCTTACGAAGAAACCTCAGGTCTCTGCTTTGGACGAGGATGTCTCAGACACTTCGTCAAATTCCTGTGAGTACGGAAACTCCGATGATCCCTCAAAAACAAATTTGTCGCTGCCAGAAGTTGAAGCAAGGGTGTCGAAGAAGAACGTGCTGATTCGAATCCTGTGCGAGAAAGAAAAGGCAGTGCAGGTGAACATATTTAGAGAGATAGAGAAACTTCATCTCTCGGTCATCAACAGCACCGCCTTGTCTTTCGGTTCCTCTGTTCTCGACACAACCATCGTGGCCGAGGTACATTATTATTAG 966 0.4503 MTSMEESWTSWLCDMEPDDYSFISQSDIKVDAHNDIATALEENQQSTFSTESYSSVVAESGLELERPFKLLKTCTSNNAKTEQLPQKSASSPCSYILSFDNTNPPTTKVESASKPGTKVVTNRGKALPSKNEPRRVTQESKKLGSLARSSHHTQDHIIAERKRREKINQQFIALSALIPDLKKMDKVSVLGDAIKYVKQLKEQVKVLEEQSKRKSEESVLLLTKKPQVSALDEDVSDTSSNSCEYGNSDDPSKTNLSLPEVEARVSKKNVLIRILCEKEKAVQVNIFREIEKLHLSVINSTALSFGSSVLDTTIVAEVHYY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3775g00001 321 SMART finulus 157 206 IPR011598 GO:0046983
Mupr3775g00001 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 222 IPR036638 GO:0046983
Mupr3775g00001 321 Coils Coil 190 217 - -
Mupr3775g00001 321 Gene3D - 144 202 IPR036638 GO:0046983
Mupr3775g00001 321 MobiDBLite consensus disorder prediction 232 255 - -
Mupr3775g00001 321 PANTHER BHLH TRANSCRIPTION FACTOR 42 319 - -
Mupr3775g00001 321 MobiDBLite consensus disorder prediction 128 156 - -
Mupr3775g00001 321 Pfam Helix-loop-helix DNA-binding domain 155 201 IPR011598 GO:0046983
Mupr3775g00001 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Mupr3775g00001 321 MobiDBLite consensus disorder prediction 104 156 - -
Mupr3775g00001 321 MobiDBLite consensus disorder prediction 104 118 - -
Mupr3775g00001 321 MobiDBLite consensus disorder prediction 231 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3775g00001 Mupr-Chr3775 19098 20485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3775g00001 9 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.199 3.77e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr3775g00001 HLH 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3775g00001 - - gmx:100803386 440.654