Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3768g00001 ATGAGCGGCTTGTATAGAGGGAGGAAGAGAAGCATCACTGAACAAGGAATCTTCGTCGTGGAATCTGAGGAAACCACAATGTCACAGCCAAGGCAAAACAAGATGATGAGTCCAAACGTTACTAGACAAGTTAACGACACAACCTATACTAAGATCTTTGTGGGAGGACTGGCTTGGGAAACTAAGAGAGACACTCTGAAACTCTATTTTGATCAGTTTGGTGAGATCTTAGAGGCCGTTGTCATCAATGACAGAAACACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTCAGGGACCCAAATTCTGCAATAAGAGCTTGTCAGAATCCCTATCCTGTGATTGATGGAAGGAGAACTAACTGTAATCTTGCAGCTCTTGGTGCCCAGAAATTTGATCCATCTGTAACAGGAAGACAAAAATTCAGTAGCCCTTCATGGAATATGGCACCAATCCCACTGCAAGGCACCTCCTCAACTTATTATAATCAGCACATACCTCAGTACCCATTTTCATATCCAGCCTACAGGTATCCTGGTTATCCTCACCCACAAGACTTGTATGAAATGAACTGCAATAATGTATATGGAGGACAGCAGCATCCACTCCGCTGGTTTCCAGCATATTACCAACCCTTTTATGGCCTTAGTAGACAGTTTATTCCAGCAGCATATGTGAAAAAGGCACAAACCCCTGACATGTCACCACAGGACTTCACAGTTGTTGGCTTCTCAGAACCTATTTCTATTTCAGCTTCTCCTTCAATTTCCAGCACTGGATTAGTCACAGGAACAGTACCTGCAACAGGAGTGCTAGAATCCCCCCAAGAACAGAAATCTTCAACTTAA 849 0.4335 MSGLYRGRKRSITEQGIFVVESEETTMSQPRQNKMMSPNVTRQVNDTTYTKIFVGGLAWETKRDTLKLYFDQFGEILEAVVINDRNTGRSKGYGFVTFRDPNSAIRACQNPYPVIDGRRTNCNLAALGAQKFDPSVTGRQKFSSPSWNMAPIPLQGTSSTYYNQHIPQYPFSYPAYRYPGYPHPQDLYEMNCNNVYGGQQHPLRWFPAYYQPFYGLSRQFIPAAYVKKAQTPDMSPQDFTVVGFSEPISISASPSISSTGLVTGTVPATGVLESPQEQKSST 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3768g00001 282 PANTHER BOULE-RELATED 28 235 - -
Mupr3768g00001 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 127 IPR000504 GO:0003723
Mupr3768g00001 282 SUPERFAMILY RNA-binding domain, RBD 27 125 IPR035979 GO:0003676
Mupr3768g00001 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 109 IPR000504 GO:0003723
Mupr3768g00001 282 Gene3D - 17 138 IPR012677 -
Mupr3768g00001 282 CDD RRM_RBM24_RBM38_like 50 125 - -
Mupr3768g00001 282 SMART rrm1_1 51 123 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3768g00001 Mupr-Chr3768 3775 6128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3768g00001 34 126 C2H2 Transcription Factor Family AT2G19380 37.634 8.99e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3768g00001 - - gmx:100788634 457.603