Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3760g00002 ATGCAAACACGAAGGGTAGTTCCGTCAACACAAATACACGAGTTGCAGTATATAAACCCCTCTCGGTCAAGCTCTTCATATGATACACTCCTTCACTACTCGCGGCTAGGGTTTAAGCGCAGCTTCTTTCTTCGAGTTGGAGGAGTTATGGGTAAAGAGAAGGTTCACATTAACATCGTGGTCATTGGCCATGTTGACTCTGGAAAGTCAACTACCACCGGCCACCTCATCTACAAGCTTGGAGGTATTGACAAGCGTGTTATTGAGAGGTTTGAGAAAGAAGCTGCTGAGATGAACAAGAGGTCTTTCAAGTATGCATGGGTGTTGGACAAGCTCAAGGCTGAGCGTGAAAGAGGAATCACCATTGATATTGCCTTGTGGAAGTTTGAGACTACTAAGTACTACTGCACAGTCATTGATGCTCCTGGACACAGGGATTTCATTAAGAATATGATTACCGGGACATCGCAAGCTGATTGCGCTGTTCTTATTATCGATTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGACTCGTGAACATGCTCTCCTTGCTTTCACCCTCGGTGTGAGGCAGATGATTTGCTGCTGTAACAAGATGGACGCTACTACTCCCAAGTACTCCAAGGCCAGATATGATGAAATTGTGAAGGAAGTTTCTTCTTACATGAAGAAGGTCGGATATAACCCTGACAAGATCCCTTTTGTTCCCATCTCTGGTTTTGAGGGAGATAACATGATTGAGAGGTCTACAAACCTCGACTGGTACAAGGGTCCAACACTTTTGGAGGCCCTTGATCAGATCAACGAGCCCAAGAGGCCATCAGACAAGCCCCTTCGATTACCCCTTCAGGATGTGTACAAGATTGGAGGAATTGGAACTGTGCCTGTTGGACGAGTTGAAACTGGTATCCTGAAACCCGGAATGGTGGTTACGTTTGCTCCAACTGGACTGACAACTGAAGTGAAGTCCGTGGAGATGCACCATGAAGCTCTGACAGAGGCCCTTCCCGGTGACAATGTTGGATTCAATGTTAAGAATGTTGCTGTCAAGGATCTCAAGCGTGGTTTTGTAGCCTCAAACTCTAAGGACGACCCTGCCAAAGAAGCTGCTAACTTTACATCCCAAGTTATCATCATGAATCACCCTGGACAGATTGGAAATGGCTATGCACCTGTTCTTGATTGCCACACCTCCCACATTGCTGTCAAGTTTGCTGAACTTGTGACCAAGATTGACAGGCGTTCTGGTAAAGAGCTTGAGAAGGAGCCCAAATTCCTGAAGAATGGAGATGCTGGTTATGTCAAGATGGTTCCCACCAAGCCCATGGTGGTTGAAACCTTCTCTGACTATCCTCCACTTGGTCGTTTTGCTGTGAGGGACATGCGTCAAACTGTGGCTGTGGGAGTCATCAAGAACGTGGAGAAGAAGGACCCTACTGGAGCTAAGGTCACCAAGGCTGCACAGAAGAAGGGCAATATAGGGAATTTGTTTTTTGAATTTTCTGTCAGGTCTGCACCGTCATCTCGCCAATTTTGTTCTCAAAACTGGTGTCGTTTTAAATTTTTTGGTGGGTCATTCTTGTGGCGGTACGAGATCGTGAAAGTTTACCATGGGTCATTCATCTTGGACGAGAACCTGGTGGTTGAGAGAGATTCGTTAATACCTGATGATAATAGGATATGA 1698 0.4605 MQTRRVVPSTQIHELQYINPSRSSSSYDTLLHYSRLGFKRSFFLRVGGVMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYMKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGYVKMVPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAQKKGNIGNLFFEFSVRSAPSSRQFCSQNWCRFKFFGGSFLWRYEIVKVYHGSFILDENLVVERDSLIPDDNRI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3760g00002 565 NCBIfam translation elongation factor EF-1 subunit alpha 50 482 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mupr3760g00002 565 Hamap Elongation factor Tu [tuf]. 51 481 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mupr3760g00002 565 FunFam Elongation factor 1-alpha 372 479 - -
Mupr3760g00002 565 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 54 279 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 Gene3D - 44 277 IPR027417 -
Mupr3760g00002 565 Pfam Elongation factor Tu C-terminal domain 371 478 IPR004160 -
Mupr3760g00002 565 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Mupr3760g00002 565 Gene3D Translation factors 278 365 - -
Mupr3760g00002 565 PRINTS GTP-binding elongation factor signature 58 71 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 PRINTS GTP-binding elongation factor signature 153 164 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 PRINTS GTP-binding elongation factor signature 197 206 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 PRINTS GTP-binding elongation factor signature 137 147 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 375 478 IPR009001 -
Mupr3760g00002 565 CDD EF1_alpha 58 276 - -
Mupr3760g00002 565 CDD EF1_alpha_III 372 475 - -
Mupr3760g00002 565 CDD EF1_alpha_II 279 369 - -
Mupr3760g00002 565 FunFam Elongation factor 1-alpha 278 365 - -
Mupr3760g00002 565 Pfam Elongation factor Tu domain 2 297 362 IPR004161 GO:0005525
Mupr3760g00002 565 Pfam Elongation factor Tu GTP binding domain 55 271 IPR000795 GO:0003924|GO:0005525
Mupr3760g00002 565 Gene3D Translation factors 372 479 - -
Mupr3760g00002 565 SUPERFAMILY Translation proteins 280 370 IPR009000 -
Mupr3760g00002 565 FunFam Elongation factor 1-alpha 50 275 - -
Mupr3760g00002 565 PANTHER TRANSLATION FACTOR 53 482 - -
Mupr3760g00002 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3760g00002 Mupr-Chr3760 14138 16487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3760g00002 50 489 Eukaryotic Initiation Factors Gene Family AT5G60390 95.682 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3760g00002 K03231 - gmx:100801611 889.026