Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr374g00002 ATGGCTTCATCTTCCCCCGACCCTGGCAAGTCGGAAGCTGGTGGCGGTTCGGAGACTCCGGAAGCAACGGTGGCGAACGATGAAAAACGGTTGAAGAAAGCGAAGAAAGAGAGAGCGTGCACCGCGAAAGAGAGAATCAGCAAAATGGCTCCTTGTGCTGCAGGCAAACGCAGCTCCATATACCGCGGCGTCACCAGGCATAGATGGACTGGGCGTTACGAAGCACATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAATAAGAAAGGAAAGCAAGGGGCATATGATGATGAAGAGGCAGCAGCTAGAGCATATGACCTTGCTGCTCTCAAATATTGGGGTCCAAGTGCTCTCATAAACTTTCCAGTGACAGATTATGCAAGAGATCTTGAAGAAATGCAGAATGTATCAAGAGAGGAATTCCTAGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGACTATCCAAATACCAGGGACTCTCCAGGTGCGATTCTGTCAAAAGAATACCAAAAGATTGCAATAAAAGTGCACATACAGGCACACACAATTTTGCATTCATCATCTTTATTCGATGGGATCCAACATATGGTCGTATGGCTGGATCTACCTACTTCAATAGTGTATATTATGGTGAAGATTCAGCCACAGAAACCAAATACCTAAGTAGTTTCTGCATAGAAAGAAAGATTGATTTATCAACTTACATCAAATGGTGGGGGTGTAATAAAAGTCGCAAACCTGATGCTGGAGCAAGATTTTCGGCCGTTAAAAAGCAAGGTTTTGGTGGAGATATTTGCCGCGAACTCAAAACATTGGAACAAAAGGTCCATCCTTCAGAACCATACCAGTTGCCAGTGTTAGGCATGCCCCATGAAAGGAGAAAACATGAACGTGCTTTTGTCTCTGCTCTAAGTATTTTGTCACAATCAGCTGCTTACAAGAACATGAAACAGAAAGCATCAAAGAGACAGGAAAACAGCAATGATCATGATGAGAATGAAAATAAAAATACCATAAAAAAGTTGGACCATGGCAAGGAAGCTGAGAAATCGTTGAATCATGATAATGACAATGAAGGACTTGAAATTGCAATGGGAATGAATGGATCACTGCCTCTTCAAAGAAATGTTCCTATACTTCCTGCTGGCCTTTCCAGTGTAGCTGAGGTTGGTATAGTTGCTAAAGTGCTTTACTTTTGA 1209 0.4301 MASSSPDPGKSEAGGGSETPEATVANDEKRLKKAKKERACTAKERISKMAPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPSALINFPVTDYARDLEEMQNVSREEFLASLRRKSSGFSRGLSKYQGLSRCDSVKRIPKDCNKSAHTGTHNFAFIIFIRWDPTYGRMAGSTYFNSVYYGEDSATETKYLSSFCIERKIDLSTYIKWWGCNKSRKPDAGARFSAVKKQGFGGDICRELKTLEQKVHPSEPYQLPVLGMPHERRKHERAFVSALSILSQSAAYKNMKQKASKRQENSNDHDENENKNTIKKLDHGKEAEKSLNHDNDNEGLEIAMGMNGSLPLQRNVPILPAGLSSVAEVGIVAKVLYF 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr374g00002 402 MobiDBLite consensus disorder prediction 1 42 - -
Mupr374g00002 402 Pfam AP2 domain 60 115 IPR001471 GO:0003700|GO:0006355
Mupr374g00002 402 ProSiteProfiles AP2/ERF domain profile. 60 123 IPR001471 GO:0003700|GO:0006355
Mupr374g00002 402 SMART rav1_2 60 129 IPR001471 GO:0003700|GO:0006355
Mupr374g00002 402 MobiDBLite consensus disorder prediction 321 360 - -
Mupr374g00002 402 Coils Coil 24 44 - -
Mupr374g00002 402 Gene3D AP2/ERF domain 60 125 IPR036955 GO:0003700|GO:0006355
Mupr374g00002 402 SUPERFAMILY DNA-binding domain 59 124 IPR016177 GO:0003677
Mupr374g00002 402 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mupr374g00002 402 PRINTS Ethylene responsive element binding protein signature 105 125 IPR001471 GO:0003700|GO:0006355
Mupr374g00002 402 MobiDBLite consensus disorder prediction 23 42 - -
Mupr374g00002 402 FunFam AP2-like ethylene-responsive transcription factor 59 125 - -
Mupr374g00002 402 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 27 337 - -
Mupr374g00002 402 MobiDBLite consensus disorder prediction 318 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr374g00002 Mupr-Chr374 8107 12116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr374g00002 23 389 AP2-EREBP Transcription Factor Family AT2G41710 53.906 2.12e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr374g00002 AP2 2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr374g00002 K09285 - gmx:100795084 545.428