Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3748g00003 ATGCGGAGCTTCAGGATGAGAAACTTGTTGTCTCGTGTCCTAAGAACAAAGAAAACCATCAGAAACAGAAACCGTAACAAATACACACGAACCTGCATTTCCTTAACAAAAGAGTTAGCGTGTCAAGTGGAACAAGAAGAAGTAGAAGAAGAAGAAGTAGAAGAAGAAGTAGAAGAAGAAGGTTTCAGCATCAAAAGCTCTACCCCATCACACACCCACGGAGTTCAGCCATTGGGAAACCTGTATCTGAACTCAGGCTCCACCAACTCCAGAGACACCGGCTTAGGTTATCTTCATGCCCTTTCGGATGAGCTTGTTCTCGACATTCTTGGCTTTTTGGATGCTTCCTGCTTAGGGCTTTTGGCCACTGTGAGCAAGTCTTTCTACGTCTTCACCAACCACGAACCCCTTTGGAGGAATCTCGTCTTGGACAATCTTCTCGGTGGGTTTCGCTACAATGGGTCTTGGAAATCCACTTATGTTTCTGCTTGTTACCCTTCATTTCGTAACTTCACTATTGCTCTTGGGGGTTTCAAAGTTAGGGACTTTTATTCGGATTACCTTTTCCAGAGTTGGCTCTGTGCTAATCTCGAAATGAAACCCGAGTGGTTGGAGAGGGATAATGTGGTTCGGAAGAGGGGAATTTCGGTGGAAGAGTTTGTGTTGAATTTCGAGGAGCCTAATAAGCCGGTGTTGTTAGAAGGGTGTATTGAGAATTGGGGTGCGTTGAGAAATTGGGATAGGGATTACTTGGTGTCATTGTGTGATGATGTTAAGTTTTCAGTGGGACCAGTGGAGATGAAGCTTGAAGACTATTTCAGGTACTCGGATGAAGTTAGAGAGGAAAGGCCTTTGTATTTGTTTGATCCTAAGTTTGCTGAAAAAGTTCCAAAATTGGGTGATGAATATGAAGTTCCAGTTTACTTTAGGGAGGACTTGTTTGGTGTTTTGGGCAATGAGAGGCCAGACTACAGGTGGATTATTATTGGACCTGCTGGGTCTGGATCATCTTTCCATGTTGATCCAAATTCGACTTCGGCTTGGAATGCAGTGATCACGGGATCCAAGAAATGGATATTGTTTCCTCCCGATGTGATTCCGCCTGGTGTTCATCCTAGTCCTGATGGTGCCGAGGTGGCATCTCCTGTTTCAATAATTGAATGGTTCATGAACTTCTATGGTGCAACCAAAAATTGGAAAAAGAGACCAATTGAGTGCATATGTAAAGCTGGAGAGGTTATCTTTGTGCCTAGTGGATGGTGGCATTTGGTGATCAACCTGGAGGAGTCTATAGCCATAACCCAAAACTATGTTAGTAGGAGAAATTTGGTAAATGTCTTGGATTTTCTTAAAAGGCCAAATGCTAGCACACTGGTATCTGGAACAAGGGATCGAGTGAATTTGTACGATAAGTTTAAGAATGCTATTGAGGCTTCTTTTCCTGGAGAAATTGATGAGTTGACTAGAAAAGAAGAAGAAAGAAAGACCCAGCAAAGGAAAGTTTCATTCTGGGATTCTGTCTCCGATGCCAACGTGGGAGCTTTCAAGTTCTCTTTCTAG 1560 0.4327 MRSFRMRNLLSRVLRTKKTIRNRNRNKYTRTCISLTKELACQVEQEEVEEEEVEEEVEEEGFSIKSSTPSHTHGVQPLGNLYLNSGSTNSRDTGLGYLHALSDELVLDILGFLDASCLGLLATVSKSFYVFTNHEPLWRNLVLDNLLGGFRYNGSWKSTYVSACYPSFRNFTIALGGFKVRDFYSDYLFQSWLCANLEMKPEWLERDNVVRKRGISVEEFVLNFEEPNKPVLLEGCIENWGALRNWDRDYLVSLCDDVKFSVGPVEMKLEDYFRYSDEVREERPLYLFDPKFAEKVPKLGDEYEVPVYFREDLFGVLGNERPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVITGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNFYGATKNWKKRPIECICKAGEVIFVPSGWWHLVINLEESIAITQNYVSRRNLVNVLDFLKRPNASTLVSGTRDRVNLYDKFKNAIEASFPGEIDELTRKEEERKTQQRKVSFWDSVSDANVGAFKFSF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3748g00003 519 Gene3D - 88 169 - -
Mupr3748g00003 519 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 95 517 - -
Mupr3748g00003 519 SMART cupin_9 285 454 IPR003347 -
Mupr3748g00003 519 Pfam F-box-like 103 143 IPR001810 GO:0005515
Mupr3748g00003 519 Pfam Cupin-like domain 219 437 IPR041667 -
Mupr3748g00003 519 SUPERFAMILY Clavaminate synthase-like 211 452 - -
Mupr3748g00003 519 ProSiteProfiles JmjC domain profile. 294 454 IPR003347 -
Mupr3748g00003 519 SUPERFAMILY F-box domain 93 163 IPR036047 GO:0005515
Mupr3748g00003 519 Gene3D Cupin 190 439 - -
Mupr3748g00003 519 FunFam F-box protein At1g78280 189 439 - -
Mupr3748g00003 519 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3748g00003 Mupr-Chr3748 13401 15980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3748g00003 86 443 Glycosyltransferase AT1G78280 38.420 2.05e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr3748g00003 Cupin_8 6.4e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3748g00003 - - gmx:100782241 926.391