Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3725g00005 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTATTACCAACTCTCATGCTCTAAACAAAACCTCGATCATAATTGATGCATCAAAGTATATCGAAGAGTTAAAGCAAAAGGTAGAAAGACTGAATCAAGACATAGCCAATGCACCAACTTCAAGCGACCAAAATACTTTGCCTGTGGTTACGGTAGAAACCTTAGAAAAGGGATTTCTTATAAATGTTTTTTCAGCAAAGAGCTGCCCCGGTCTGCTTGTTTCGATATTGGAGTCATTTGAAGAGATGGGTCTTAATGTGCTTGAAGCTAGGGTTACTTGTACGGACACATTTCGATTTCATGCTGTTGGAGGAGAAAATGAAGAACAAGGTGAGAGTATTGATGCGCAGGCTGTGAAACAGGCAATGGGACAAGCAATAAAGAACTGGAGCGAAAATGCTGACCAAAAGTAA 471 0.4076 MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQDIANAPTSSDQNTLPVVTVETLEKGFLINVFSAKSCPGLLVSILESFEEMGLNVLEARVTCTDTFRFHAVGGENEEQGESIDAQAVKQAMGQAIKNWSENADQK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3725g00005 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 59 IPR036638 GO:0046983
Mupr3725g00005 156 Coils Coil 33 60 - -
Mupr3725g00005 156 CDD ACT_UUR-ACR-like 89 146 - -
Mupr3725g00005 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3725g00005 Mupr-Chr3725 40381 41845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3725g00005 11 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.556 2.61e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3725g00005 - - gmx:100814138 278.87