Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr370g00014 ATGGGTTCTGCTGAAGTTGAGTACCGATGCTTTGTTGGTGGGCTAGCCTGGGCCACCGACAAAGAAGCGCTCGAGAAAGCCTTCTCCGCCTACGGCGAGGTCGTTGATTCGAAGATCATCAACGATCGTGAGACTGGAAGGTCCAGGGGGTTTGGATTTGTGACTTTTTCCTCGGAGCAGTCCATGAAAGATGCGATCGAAGCGATGAACGGTCAGAACCTTGACGGCCGTAACATCACAGTGAATGAAGCTCAGTCCCGCGGCAGCCGCGGTGGTGGCGGCGGCGGCGGTGGATACGGAGGTGGTGGTGGTGGATACAATCGTGGTGGTGGTGGATATGGCGGTGGCGGCGGTGGATATGGTGGAGGCGGCGGCGGATATGGTGGACGTCGTGAAGGTGGCTACAACCGTAACGGTGGAGGCGGTGGATATGGAGGTGGTGGTGGTTATGGCGGTGGCAGGGACCGCGGTTATGGTGACGGTGGCTCACGCTACTCCCGTGGTGGTGAAGGTGGCGGTTCTGATGGAAACTGGAACTAG 540 0.587 MGSAEVEYRCFVGGLAWATDKEALEKAFSAYGEVVDSKIINDRETGRSRGFGFVTFSSEQSMKDAIEAMNGQNLDGRNITVNEAQSRGSRGGGGGGGGYGGGGGGYNRGGGGYGGGGGGYGGGGGGYGGRREGGYNRNGGGGGYGGGGGYGGGRDRGYGDGGSRYSRGGEGGGSDGNWN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr370g00014 179 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mupr370g00014 179 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mupr370g00014 179 Gene3D - 2 107 IPR012677 -
Mupr370g00014 179 MobiDBLite consensus disorder prediction 81 101 - -
Mupr370g00014 179 MobiDBLite consensus disorder prediction 120 179 - -
Mupr370g00014 179 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
Mupr370g00014 179 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mupr370g00014 179 CDD RRM2_NsCP33_like 9 84 - -
Mupr370g00014 179 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 175 - -
Mupr370g00014 179 FunFam Glycine-rich RNA-binding protein GRP1A 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr370g00014 Mupr-Chr370 84589 85396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr370g00014 10 90 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 2.71e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr370g00014 - K13195 ccaj:109800369 157.532