Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr370g00013 ATGGGTTCTGCCGATGTTGAGTACCGATGCTTTGTTGGTGGGCTAGCCTGGGCCACCGACCAAGAAGCGCTCGAGAAAGCCTTCTCCCCCTACGGCGAGATCATTGATTCGAAGATTATCAACGATCGCGAGACTGGAAGGTCCAGGGGTTTCGGATTTGTGACCTTCGCCACGGAACAGTCAATGAAAGACGCGATCGAAGCGATGAACGGTCAGAACCTTGACGGCCGTAACATCACTGTCAACGAAGCTCAGTCCCGCGGTGGCGGAGGCGGAGGCGGCGGTGGTTACGGAGGTGGCGGTGGATACAACCGTGGTGGTGGCGGTGGATATGGCCGCGGTGGTGGAGGCGGTGGATATGGTGGTCGTCGTGAAGGTGGGTACAATCGTAATGGTGGAGGCGGAGGCTATGGAGGTGGTGGTGGTTATGGTGGTGGCAGAGACCGTGGTTATGGTGATGGTGGTTCACGCTACTCTCGTGGTGGTGATGGCGGCGGTGCTGATGGAAGCTGGAGAAACTAA 522 0.5785 MGSADVEYRCFVGGLAWATDQEALEKAFSPYGEIIDSKIINDRETGRSRGFGFVTFATEQSMKDAIEAMNGQNLDGRNITVNEAQSRGGGGGGGGGYGGGGGYNRGGGGGYGRGGGGGGYGGRREGGYNRNGGGGGYGGGGGYGGGRDRGYGDGGSRYSRGGDGGGADGSWRN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr370g00013 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Mupr370g00013 173 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 167 - -
Mupr370g00013 173 MobiDBLite consensus disorder prediction 119 173 - -
Mupr370g00013 173 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Mupr370g00013 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mupr370g00013 173 Gene3D - 2 104 IPR012677 -
Mupr370g00013 173 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mupr370g00013 173 CDD RRM2_NsCP33_like 9 84 - -
Mupr370g00013 173 SUPERFAMILY RNA-binding domain, RBD 8 118 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr370g00013 Mupr-Chr370 77331 78125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr370g00013 10 88 Eukaryotic Initiation Factors Gene Family AT2G23350 34.177 1.36e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr370g00013 - K13195 qsa:O6P43_001900 160.229