Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr370g00013 | ATGGGTTCTGCCGATGTTGAGTACCGATGCTTTGTTGGTGGGCTAGCCTGGGCCACCGACCAAGAAGCGCTCGAGAAAGCCTTCTCCCCCTACGGCGAGATCATTGATTCGAAGATTATCAACGATCGCGAGACTGGAAGGTCCAGGGGTTTCGGATTTGTGACCTTCGCCACGGAACAGTCAATGAAAGACGCGATCGAAGCGATGAACGGTCAGAACCTTGACGGCCGTAACATCACTGTCAACGAAGCTCAGTCCCGCGGTGGCGGAGGCGGAGGCGGCGGTGGTTACGGAGGTGGCGGTGGATACAACCGTGGTGGTGGCGGTGGATATGGCCGCGGTGGTGGAGGCGGTGGATATGGTGGTCGTCGTGAAGGTGGGTACAATCGTAATGGTGGAGGCGGAGGCTATGGAGGTGGTGGTGGTTATGGTGGTGGCAGAGACCGTGGTTATGGTGATGGTGGTTCACGCTACTCTCGTGGTGGTGATGGCGGCGGTGCTGATGGAAGCTGGAGAAACTAA | 522 | 0.5785 | MGSADVEYRCFVGGLAWATDQEALEKAFSPYGEIIDSKIINDRETGRSRGFGFVTFATEQSMKDAIEAMNGQNLDGRNITVNEAQSRGGGGGGGGGYGGGGGYNRGGGGGYGRGGGGGGYGGRREGGYNRNGGGGGYGGGGGYGGGRDRGYGDGGSRYSRGGDGGGADGSWRN | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr370g00013 | 173 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 79 | IPR000504 | GO:0003723 | |
Mupr370g00013 | 173 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 9 | 167 | - | - | |
Mupr370g00013 | 173 | MobiDBLite | consensus disorder prediction | 119 | 173 | - | - | |
Mupr370g00013 | 173 | FunFam | Glycine-rich RNA-binding protein GRP1A | 2 | 114 | - | - | |
Mupr370g00013 | 173 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 8 | 86 | IPR000504 | GO:0003723 | |
Mupr370g00013 | 173 | Gene3D | - | 2 | 104 | IPR012677 | - | |
Mupr370g00013 | 173 | SMART | rrm1_1 | 9 | 82 | IPR000504 | GO:0003723 | |
Mupr370g00013 | 173 | CDD | RRM2_NsCP33_like | 9 | 84 | - | - | |
Mupr370g00013 | 173 | SUPERFAMILY | RNA-binding domain, RBD | 8 | 118 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr370g00013 | Mupr-Chr370 | 77331 | 78125 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr370g00013 | 10 | 88 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 34.177 | 1.36e-06 | 45.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr370g00013 | - | K13195 | qsa:O6P43_001900 | 160.229 |