Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3705g00002 ATGCTTTTTGTTTGCACCCTTCGCTTTCTAAGCTTTCATGGAGTAAAAGGTCGTCTGCAAGGGGCACCAGTGTATTACTATTGCCCACCAACTTTTGAAGAGCACGAGTCTTTAACAACCCATGATGGTGCAAATGCTTCACTTAATTCTGGATTTTTGGTTGGTTTCAACCTGGAAGCATCCATGCCTGATACTTTCCAGCCCCCTCCTGTGCCTCTACCTTATGATATGGTCTTGGGAGGTTCTGCATCAACAGATTCTGAATCTGGCAGAGAAACACTTAGTAGTTTTGAAACTTTAATTACATGCGACGATGTTGAAGAATCAGATTGTAAAGCTCAAGCCAATTCTGCTCCTACATCTCCAAGAAAGGCGGAGGTACCAAAATCAAATGGAAATGAAGTATTAGTGATAGAAGAAGAGGATGTCTGTCCAATTTGTCTTGAAGAATATGATGTTGAAAATCCTAGAAATTTGACAAAATGTGAACACCATTTTCACCTATCTTGCATTCTAGAGTGGATGGAAAGAAGTGACTCCTGTCCTATATGTGATCAGGTTGGTGAGCTTAGTTGTCAGTATTTTGCTTTGCTTGATGAAGAAGGAATTGATGATATTGCAATTTCTAGAAATGGAAGAGAATAA 645 0.3969 MLFVCTLRFLSFHGVKGRLQGAPVYYYCPPTFEEHESLTTHDGANASLNSGFLVGFNLEASMPDTFQPPPVPLPYDMVLGGSASTDSESGRETLSSFETLITCDDVEESDCKAQANSAPTSPRKAEVPKSNGNEVLVIEEEDVCPICLEEYDVENPRNLTKCEHHFHLSCILEWMERSDSCPICDQVGELSCQYFALLDEEGIDDIAISRNGRE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3705g00002 214 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 44 187 - -
Mupr3705g00002 214 ProSiteProfiles Zinc finger RING-type profile. 144 185 IPR001841 -
Mupr3705g00002 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 189 IPR013083 -
Mupr3705g00002 214 SUPERFAMILY RING/U-box 137 187 - -
Mupr3705g00002 214 CDD RING-H2_AIRP1-like 140 187 - -
Mupr3705g00002 214 SMART ring_2 144 184 IPR001841 -
Mupr3705g00002 214 FunFam Putative E3 ubiquitin-protein ligase RHB1A 120 188 - -
Mupr3705g00002 214 Pfam Ring finger domain 143 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3705g00002 Mupr-Chr3705 7103 11713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3705g00002 16 186 C3H Transcription Factor Family AT4G00335 58.960 2.29e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3705g00002 - - gmx:100812687 316.235