Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3690g00001 ATGAGTAGTGAAGGGGACATGTCCAATAAGGATCCGGGTATTAGGCTCTTTGGCAGGAAGATTCCGTTGCCGGAATGTCAGATTCCGGCGAGTTCTCAAATGGGGTGTCAGATTCAGGCCAACTCTGCAACCATGAATGTTTGCAGTGACTTCAAGAAAACTGAAGCTGAAATGCCTTGTGCTGAAAACTCTGAGCAACCAGAGAAATCTTCTGATTCAAGGGATAGCAAACAAGAGTCCCTACATAATAATGTGCAGGAAAATGGGTCAAAAGTAAATACCAAGTCTGTGGAAGATAACATGGAGAGTAGCAGTACAGACCAAGATAAAATCTTCAAGAAACCAGACAAGATTCTTCACTGTCCACGGTGTAACAGTTTGGACACTAAATTCTGTTATTTCAATAACTACAATGTTAATCAACCTCGGCATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGAACAATGAGAAATGTTCCAGTGGGTGCTGGGAGACGAAAGAACAAGCATCTAGCTTCTCAATACCGGCATATTATTGTAGCTTCTGATGGAATTCCAACCACCAGGTTCGAAACCAATGACTCTTCTCGTCACCAACTTGTCTCAACTCTTGAATCTGTTGCTGTTTACAGGTCTTCAACAGACAATGGTACTGTATTGAAATTTGGTCCAGATGCCCCTCCTCTCTGTGAATCCATGGAGTCAATGCTTAATCTTAAAGAACAAAAAAGAAGTGTTGATGCAAACATTGTCAATTGTGCAGAAAACGGGGAGGAGGAAGTATCCTTATGTGGATCATCTGTGACCAATGCTTGCACTTCAAGAAATGAATTGTCAGAATGTAACGCATCAAAACCTTTGCAGTGTTACCCTGTTCCTCCATGGATATTCCCTTGGAATCCAGGTTGGAACAATGTTGCTTCCACGAGAGCAGTTCCCCCGTCTCCACTGCACATATGCAACCCTTATAGTGCTGACCCCGCTTCAATGCAGTGGTGTCCCACACCAATGGTGGCCGTTCCAACCATCTGCCCACCAAGCTTTCCCTTGCAATTTGTTCCTGGATCATACTGGGGTGGACCACCCGTCTGGGGTGCTGGAACAGGAGCAGTTTCAAATGGTTTCAATGGTTGCCTTTCACCCACTTCCTCTACTAGTAATAGCTGCTGCTCGGGCAATGGCTCTCCGACACTTGGTAAACACACAAGGGAAACTGTTTTCACAGATGAAGAGAAACCAGACATGTATGTTTTGGTTCCAAAGACCCTTAGAATTGATGATCCAAATGAGGCCTCAAAATGTCCTATATGGGCTTCATTAGGAATCAAGCCTGATAACCAGCAATCTGTATCAGAAGATGCTATTTCGAAAAGGGCAAAGCCTAAAGAAGGCAAAGACCGTGTGTTGGGTGTGTCTCAAATCTTGGAAGCCAACCCTGCAGCTATTTCTCGTGCTCATGCATTCCAAGAGAGCATATAA 1488 0.4435 MSSEGDMSNKDPGIRLFGRKIPLPECQIPASSQMGCQIQANSATMNVCSDFKKTEAEMPCAENSEQPEKSSDSRDSKQESLHNNVQENGSKVNTKSVEDNMESSSTDQDKIFKKPDKILHCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQYRHIIVASDGIPTTRFETNDSSRHQLVSTLESVAVYRSSTDNGTVLKFGPDAPPLCESMESMLNLKEQKRSVDANIVNCAENGEEEVSLCGSSVTNACTSRNELSECNASKPLQCYPVPPWIFPWNPGWNNVASTRAVPPSPLHICNPYSADPASMQWCPTPMVAVPTICPPSFPLQFVPGSYWGGPPVWGAGTGAVSNGFNGCLSPTSSTSNSCCSGNGSPTLGKHTRETVFTDEEKPDMYVLVPKTLRIDDPNEASKCPIWASLGIKPDNQQSVSEDAISKRAKPKEGKDRVLGVSQILEANPAAISRAHAFQESI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3690g00001 495 Pfam Dof domain, zinc finger 116 173 IPR003851 GO:0003677|GO:0006355
Mupr3690g00001 495 PANTHER CYCLIC DOF FACTOR 2 9 494 IPR045174 GO:0003700|GO:0006355
Mupr3690g00001 495 MobiDBLite consensus disorder prediction 67 81 - -
Mupr3690g00001 495 ProSitePatterns Zinc finger Dof-type signature. 121 157 IPR003851 GO:0003677|GO:0006355
Mupr3690g00001 495 MobiDBLite consensus disorder prediction 58 109 - -
Mupr3690g00001 495 ProSiteProfiles Zinc finger Dof-type profile. 119 173 IPR003851 GO:0003677|GO:0006355
Mupr3690g00001 495 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3690g00001 Mupr-Chr3690 10961 13633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3690g00001 11 494 C2C2-Dof Transcription Factor Family AT5G39660 35.593 4.50e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr3690g00001 zf-Dof 5.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3690g00001 - - ccaj:109792807 895.575