Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3681g00001 TGTCAGGTTCGTGGTTCTGAGTATAACAATATCCGCAGTCAGCTAAATGCCATCAACCGGAAGCAAAGTGGAAGCTTAGCTGTTCGTGATCTTTCTAACTTGGTAAAATCTGAGGATATTATAACGTCAGAACATTTAACTACCCTTCTTGCAATCGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTATGAAACATTGACAAACTATGTGGTTCCCAGGTCTTCCAAGAAGTTGTATGAGGATAATGAATATGCTCTTTATACTGTAACACTCTTCAGTCGAGATGCAGACAATTTTAGAACTAGTGCACGGGAAAAAGGGTTCCAAATTCGTGATTTTGAATACAGTCCAGAATCACATGAGAGTCGGAAGCAAGAGCTAGAGAAATTGATGGAAGATCAGGAAAGTTTGAGGGGTTCTCTATTGCAGTGGTGTTATACCAGTTACGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCAGTACGTGTATTTACTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTCTTAGCTCCATCAGTCAAAGCTGAGAAGAAAGTACGTTCTATCCTTGAAGGCGCATATTGGAAGGCCGAGGATGAAGGAGTTGCGATAGCTGGCCTAGCAGGTGATGCTGATGCCCATCCTTATGTCTCTTTCACTATCAATCTTGTTTAG 702 0.4231 CQVRGSEYNNIRSQLNAINRKQSGSLAVRDLSNLVKSEDIITSEHLTTLLAIVSKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFSRDADNFRTSAREKGFQIRDFEYSPESHESRKQELEKLMEDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSVKAEKKVRSILEGAYWKAEDEGVAIAGLAGDADAHPYVSFTINLV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3681g00001 233 SUPERFAMILY Vacuolar ATP synthase subunit C 2 232 IPR036132 GO:0015078|GO:0033180|GO:1902600
Mupr3681g00001 233 Pfam V-ATPase subunit C 4 209 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr3681g00001 233 Gene3D - 5 132 - -
Mupr3681g00001 233 FunFam V-type proton ATPase subunit C 28 116 - -
Mupr3681g00001 233 CDD V-ATPase_C 3 230 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr3681g00001 233 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 232 IPR004907 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3681g00001 Mupr-Chr3681 867 3935 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3681g00001 2 232 Primary Pumps ATPases(2) AT1G12840 77.731 3.70e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3681g00001 K02148 - gmx:100803728 427.172