Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3677g00003 ATGAAGAATTCTAAGAAAACCTGCGTACGGAAGTACCACAAATCGGAAAATCCACGCTTGCGTTGGACGCCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTAGGTGGAAAAAATAAGGCAACACCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTGAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAACATGAAGGGGCATACGATTCTCACATCAATGCATCAGGAGATGGAAGGAAATGAACATATTAATGACCTCCCAATCTGCTCCAATTCTTCATCCCAAAGATCACAAGGAACTAAATTAAGAGAATCAAAATATGATACGGAGATTGTTCATCAAGAAATTCACCCGTTAGACAATAAAGGACTTTCACAGACCAGTGAACCTGATTACGATCTAAATCAGGAATACGAATCAAGTGCATGCTTACTTAGTGATATGTCAAATGAAGAAAATAGTAGGACAATGAAATTTCTTGATCTCTCATTCTCTTTTAGCTCTCCGTTAATTCCAACGATGCACAGTGATCAAGAGAGAATGCGTTTTTCTTCACCAAATACAGGAAATAATCATGTCGTTGATTCGAATTCTGTACAATCTCATAAGAGTAATTATATAAATTTAGACTTAACAATATGA 666 0.3739 MKNSKKTCVRKYHKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRNMKGHTILTSMHQEMEGNEHINDLPICSNSSSQRSQGTKLRESKYDTEIVHQEIHPLDNKGLSQTSEPDYDLNQEYESSACLLSDMSNEENSRTMKFLDLSFSFSSPLIPTMHSDQERMRFSSPNTGNNHVVDSNSVQSHKSNYINLDLTI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3677g00003 221 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Mupr3677g00003 221 NCBIfam myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Mupr3677g00003 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Mupr3677g00003 221 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Mupr3677g00003 221 FunFam Two-component response regulator 13 77 - -
Mupr3677g00003 221 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 4 118 IPR046955 GO:0003700
Mupr3677g00003 221 Gene3D - 17 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3677g00003 Mupr-Chr3677 12592 16831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3677g00003 9 73 G2-like Transcription Factor Family AT2G42660 61.538 2.33e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr3677g00003 Myb_DNA-binding 2.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3677g00003 - - ccaj:109790621 372.089