Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3660g00005 ATGGACGAAGATTCGGTGAAGCGCAACACCGATTGCGTTTATTTCTTGGCCTCTCCCCTCACTTGCAAGAAGGGGGCTGAATGTGAGTATCGGCATAATGAGATTGCCAGGCTTAACCCTAGGGAGTGCTGGTACTGGGTATCTGGCCAATGCCTTAATCCAACGTGTGCTTTTAGACACCCTCCATTGGATGGGCATACTGGAGTGCCAGTGCCATCTGAACCTACACAAACTTCATTACCTGCAAACAAGTCAATGGTTCCCTGTTATTTTTTCTTCCATGGATTTTGCAACAAAGGTGACAGATGCACATTTTTGCATGGGCCTGATGATAGCAATTTTACTGTAAAACCTGTGAAGAATGACAATGGAAGCACTGATGCATTCAACCTAGAAAATAAAACATTATCAGGAAATAGAACAGGTGTAGTGTCAACACCAACTGACCAATCTTTAACTGCACCAAAGAATTTGTCTGATTTTAAACTTCAGCCCAAGGAAGGTCATCAGCTACAATTACCCAAAAATGTTAAGCGGCAAGGCGGTTGCCTAGAGATATCTGCTTTAGAATATAAAGAAGCTGCAGTGAGTCGGTCAGACTCTCCATTTCCAGATGATGGCTTTGTTCATAATGCATCTCATTTATGCACTGAACAGAGTTCAGATGAGCAAGTAAGTAGTCACATAGAGCCTGAGGAGCGGTGGGAGTCATCCCCTCATTCCCCTGGATTTGATGTTCTTGTTCATGATGAATTGGAGAACTTGGGTTACGAGGAAGACCCTGAATATTTACCGGTGCTTGAGAGGGATGAGCAAGAGCTGAATGAGCAGTACATGGGGTATGAATTTGAAGATCCAGCTGACTATGATACTATGTTCCCAGAAGCTGATATTCTGTATGAACAAGAAACATATGATGGTTATGGATGTTTAGATAGAGATCTTACTCATACTAATGGCAGAACAGTCCATGCTTACTCTAGAGACATTTTCTTAGATTCTATATTGTCCAGGAAAAGGATTCGGATGTCAGCTGAGATGGCTGCTTATGAGAAGAACTTAGATCTACGTGACCATCTGAGGAGACGTAGAGAAATTAATGGTCCTCCCGTTACAGGTTTCTTAAGAAGACAAGAATCATCTTCTTTGATGGTTCAAAACCAGGAAAGGCATCAGCGGCATGGTATTGAGCAGCGGCCAAGCAGAAGGTTGACATCACAATTGGGATACAGCGCTATGGATTCAATTGGAGAGGTTGAAACCCTTACCATTGCTAACAAGCAAAGGTTATTCAGGCAGTCCCAGCAACAAAGACCAAAGAAGCATTATAGAGAAAAACTAGCCAATCGGCAGTTTCTTTCATCTAAAATATCCAGGAAACCAGTTTTGAAACAAAGGGGATTTATTCACGAGTCCACTACATTTTCAGGACCTAAGACTCTTGCAGAAATTAAAGAAGAGAAGAAGAAGGCGGAAGGAAGTTTACATTGTAAAAGCACATCAACTGATTTCCAGGATCCCAAACCTCTGAGTGAAATTCTCAAGGACAAAAGGACCATGGATCAGTGA 1569 0.4232 MDEDSVKRNTDCVYFLASPLTCKKGAECEYRHNEIARLNPRECWYWVSGQCLNPTCAFRHPPLDGHTGVPVPSEPTQTSLPANKSMVPCYFFFHGFCNKGDRCTFLHGPDDSNFTVKPVKNDNGSTDAFNLENKTLSGNRTGVVSTPTDQSLTAPKNLSDFKLQPKEGHQLQLPKNVKRQGGCLEISALEYKEAAVSRSDSPFPDDGFVHNASHLCTEQSSDEQVSSHIEPEERWESSPHSPGFDVLVHDELENLGYEEDPEYLPVLERDEQELNEQYMGYEFEDPADYDTMFPEADILYEQETYDGYGCLDRDLTHTNGRTVHAYSRDIFLDSILSRKRIRMSAEMAAYEKNLDLRDHLRRRREINGPPVTGFLRRQESSSLMVQNQERHQRHGIEQRPSRRLTSQLGYSAMDSIGEVETLTIANKQRLFRQSQQQRPKKHYREKLANRQFLSSKISRKPVLKQRGFIHESTTFSGPKTLAEIKEEKKKAEGSLHCKSTSTDFQDPKPLSEILKDKRTMDQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3660g00005 522 SUPERFAMILY CCCH zinc finger 83 108 IPR036855 GO:0046872
Mupr3660g00005 522 Gene3D - 74 137 - -
Mupr3660g00005 522 Gene3D - 2 63 - -
Mupr3660g00005 522 MobiDBLite consensus disorder prediction 486 522 - -
Mupr3660g00005 522 FunFam Zinc finger CCCH domain-containing protein 17 1 63 - -
Mupr3660g00005 522 Pfam Zinc-finger containing family 7 63 IPR041686 -
Mupr3660g00005 522 SMART c3hfinal6 83 109 IPR000571 GO:0046872
Mupr3660g00005 522 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Mupr3660g00005 522 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Mupr3660g00005 522 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 522 - -
Mupr3660g00005 522 Pfam RNA-binding, Nab2-type zinc finger 88 108 - -
Mupr3660g00005 522 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Mupr3660g00005 522 ProSiteProfiles Zinc finger C3H1-type profile. 7 35 IPR000571 GO:0046872
Mupr3660g00005 522 ProSiteProfiles Zinc finger C3H1-type profile. 83 110 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3660g00005 Mupr-Chr3660 23089 25865 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr3660g00005 zf-CCCH_3 1.1e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3660g00005 - - gmx:100792282 898.656