Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3657g00005 ATGTCAAAGTTTTTACTAGAGGCAATAATTAGTGCCAATGTGTTTTGGCGTGTGATTGTGATTGTGATTGTGATTGTGATCCGAACAGAGCAGAGCAAAGGAAGGAAGGAAGCAATGGCGAGCAGGTACTGGGCCGTGTCTCTTCCCGTCCACAACTCCGCAACCGCGCTCTGGAGCCAATTGCAGGAACGAATCTCCAAGCATTCCTTCGACACTCCTCTCTACAGATTTAACATCCCCAACCTCCGTGTCGGAACCCTAGACTCTCTCCTTTCCCTCAGCGATGACCTCGCCAAGTCGAACAATTTCGTGGAAGGAGTGACGCACAAGATCAGGCGCCAGATTGAGGAACTCGAGAGAGCTTCTGGCGTAAACAGCGGCGGCCTCACCGTCGATGGCGTGCCCGTCGATTCCTACTTGACCAGGTTCGTTTGGGATGAGGCCAAGTACCCTACGGTGGCGCCTTTGAAGGAGATCGTAGATGGTATTCATAGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGTGCTTCTGAATATAACAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCAGTCCGGGATCTTTCTAACTTGGTAAAACCTGAGGACATTATAACTTCCGAACATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAGCTACGAAACATTGACAAGTTATGTGGTTCCCAGGTCTTCTAAGAAGTTGTACGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAATCGAGTTGCGGATAATTTTAGAACTAGTGCAAGGGAAAAAGGGTTCCAAATTCGTGACTTTGAATACAGTCCAGAAACACATGAGAACAGAAAGCAGGAGTTAGATCAATTGATACAAGATCAGGAAAGATTGAAGGCTTCTCTGTTGCAATGGTGCTATACCAGTTATGGAGAGGTTTTCAGTTCCTGGATGCATTTTTGTGCTGTGCGTTTATTTGCTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCTTGGCATGTGTTTTAGCACCTTCTGTAAAATCCGAGAAGAAAGTACGTTCTATTCTTGAAGGGTTGAGTGATAGCACAAACAGGCAAGGCGAGGATGAAGTAGGTGCTGGGATGGCTGGCCTAGCAGGTGATTCCGATGCCCATCCCTATGTTTCTTTCACTATCAATGTTGCTTGA 1236 0.4587 MSKFLLEAIISANVFWRVIVIVIVIVIRTEQSKGRKEAMASRYWAVSLPVHNSATALWSQLQERISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLAKSNNFVEGVTHKIRRQIEELERASGVNSGGLTVDGVPVDSYLTRFVWDEAKYPTVAPLKEIVDGIHSQVAKIEDDLKVRASEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEHLTTLLAIVSKYSQKDWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSAREKGFQIRDFEYSPETHENRKQELDQLIQDQERLKASLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPSVKSEKKVRSILEGLSDSTNRQGEDEVGAGMAGLAGDSDAHPYVSFTINVA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3657g00005 411 FunFam V-type proton ATPase subunit C 201 289 - -
Mupr3657g00005 411 Gene3D - 79 350 - -
Mupr3657g00005 411 Pfam V-ATPase subunit C 43 404 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr3657g00005 411 CDD V-ATPase_C 43 408 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr3657g00005 411 SUPERFAMILY Vacuolar ATP synthase subunit C 39 410 IPR036132 GO:0015078|GO:0033180|GO:1902600
Mupr3657g00005 411 Coils Coil 295 315 - -
Mupr3657g00005 411 Gene3D Vacuolar atp synthase subunit c; domain 1 47 372 - -
Mupr3657g00005 411 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 40 410 IPR004907 GO:0033180|GO:0046961|GO:1902600
Mupr3657g00005 411 Gene3D - 201 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3657g00005 Mupr-Chr3657 6976 11973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3657g00005 39 411 Primary Pumps ATPases(2) AT1G12840 80.585 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3657g00005 K02148 - gmx:100780187 690.649