Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr3656g00001 | ATGTCTTGGTTCAAATCCTATTGGAAAGTTGATGAGCAGGAGCAAATGGTGTTGGAAGCAAGGAGGAAAACCCCCAAGAGAATCACAATCATAGGCCTGCCCTCAATAGTCCTAGCAGGTGTTGTGTTTGCTACAGTATTTGGCATTGTTAGCGCCACTCATGACAACTCACATGGTGCCAATAATGCTGCTCACTCTGTGGCCAATTCAGTGAAGGCAGTGTGTGATGTGACACTGTACAAGGACTCGTGCTATAGCAGCCTTGGTTCTGTTGTGGACTCTAGGCAGGTTCGGCCTGAGGAGTTGTTCTTGTTGTCGATGAAGGTGGCCTTGTCTCAAGTGTCCAAAGCTATTGAGTATTTCAATTATCAAAACCATGCAGTTTTCAAAGGGTTCAAGGATGCCAGGACTATGGAGGCTTTGAACAATTGTAGGACTTGCATTGAAGGCTTTGAAAATGCAAAAGAAGCACTTAAGGCAAGTGTAAGTTCACCAGTAATAGTCTTGCCATCATTACATGGATTAACAAGGCTTGAAGCACCAGAATGGCTTCATTCAAAAGATAGGAAGCTTTTTATCACAAAGGATTTGAAAAAAAAAAAAGCTGACATTGTTGTGGCCAAAGATGGCATTGGGAAATATAGAACAATTTCTGATACACTTAAACATGTCCCTAACAAGAGTGACAAGAGGACTGTGATCTATGTGAAGAGAGGGATTTACTATGAAAGCGTGAGGGTAGAGAAGACAAAATGGAATGTGATGATGATTGGTGATGGTATGACTTCTACTATTGTATCTGGCAGCCGTAATTTTGTGGATGGCATACCAACATTTTCAACTGCAACATTTGGTATGTAA | 861 | 0.417 | MSWFKSYWKVDEQEQMVLEARRKTPKRITIIGLPSIVLAGVVFATVFGIVSATHDNSHGANNAAHSVANSVKAVCDVTLYKDSCYSSLGSVVDSRQVRPEELFLLSMKVALSQVSKAIEYFNYQNHAVFKGFKDARTMEALNNCRTCIEGFENAKEALKASVSSPVIVLPSLHGLTRLEAPEWLHSKDRKLFITKDLKKKKADIVVAKDGIGKYRTISDTLKHVPNKSDKRTVIYVKRGIYYESVRVEKTKWNVMMIGDGMTSTIVSGSRNFVDGIPTFSTATFGM | 286 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr3656g00001 | 286 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 67 | 165 | IPR035513 | - | |
| Mupr3656g00001 | 286 | Pfam | Plant invertase/pectin methylesterase inhibitor | 70 | 163 | IPR006501 | GO:0004857 | |
| Mupr3656g00001 | 286 | PANTHER | PECTINESTERASE | 42 | 285 | - | - | |
| Mupr3656g00001 | 286 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 69 | 161 | IPR035513 | - | |
| Mupr3656g00001 | 286 | Gene3D | - | 197 | 286 | IPR012334 | - | |
| Mupr3656g00001 | 286 | Pfam | Pectinesterase | 203 | 285 | IPR000070 | GO:0030599|GO:0042545 | |
| Mupr3656g00001 | 286 | SUPERFAMILY | Pectin lyase-like | 201 | 284 | IPR011050 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr3656g00001 | Mupr-Chr3656 | 2540 | 4519 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr3656g00001 | 7 | 286 | Carbohydrate Esterase | AT3G10710 | 39.053 | 5.46e-62 | 203 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr3656g00001 | - | - | gmx:100811152 | 353.984 |