Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3654g00005 ATGAAGAGGTCTCCAGCATCTTCTTGTTCATCATCTTCTTCTTTTGTTGGGTTTGAAACTCCTCCCATTGAGAAAAGAAAGCCTAAGCATCCAAGAAGGAATTTGAAGTCACAAAAATGCAAGCAGGGTCAAAACACTGACACTGGCAGAAGAAGCTCTATCTATAGAGGAGTTACCAGGCATAGGTGGACAGGGAGGTTTGAAGCTCACCTATGGGATAAGAGCTCTTGGAACAACATTCAGAGCAAGAAGGGACGACAAGGGGCATATGACACTGAAGAAGCTGCAGGCCGTACCTATGATCTTGCAGCCCTTAAGTACTGGGGGCAGGATGCAACCTTGAATTTTCCGATAGAAACATATACCAAAGAAATTGAGGAAATGGACAAAGTATCAAAAGAAGAATATTTGGCTTCTTTGCGGCGGCAAAGCAGTGGTTTTTCTAGAGGCATCTCTAAGTATCGTGGGGTTGCTAGACATCATCATAATGGACGCTGGGAAGCTCGCATAGGAAGAGTATGTGGAAACAAGTACCTCTACTTGGGAACATATAAAACTCAGGAGGAGGCAGCAGTGGCATATGACATGGCAGCAATAGAGTACCGTGGACTCAACGCAGTGACCAATTTTGACATAAGCAACTACATGGACAAAATAAAGAAGAAAAATGACCAAACCCAACAGCAACAAACAGAACCGCACACAGAAACACCTCCAAACTCCTCTGACTCTGAAGAAGCAGAAGTAGAACAACAGACAACAAAACCACTACCACCCTTATCTGAAAACCTGCACATGCCACCACAGCAGCACCAAGTTCAAGAATCATCCTCACCAGTCACTATCATGGACCATGTGCTTGACCAGGATCTTTCATGGAGCTTCATGTATACTGGCTTGTCTCAGTTCCAAGATCCAGACTTGGCTTTCAGCAAAGCAGATGATGATTTGGTGGGCATGTTTGATGATGCAGGGTTTGAGGAAGACATTGATTTTCTGTTCAGCACAGATCCTGGTGAGACTGAGAGTGACATCAACATGAGTGAAGTTTTGGGTAGTATTGAGTGTGGAGGCACAAATGGGGCTGGTGGAAGCATGGTGCATGTGGATAACAACCAGAATAAGATATTGTCAACATTTGCTTCTTCTTCACCTTCATCTACAACAACCACAGAGTCGAGAGAGTCTCTCTGGCTTGGAATATAA 1206 0.4428 MKRSPASSCSSSSSFVGFETPPIEKRKPKHPRRNLKSQKCKQGQNTDTGRRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGRQGAYDTEEAAGRTYDLAALKYWGQDATLNFPIETYTKEIEEMDKVSKEEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAVAYDMAAIEYRGLNAVTNFDISNYMDKIKKKNDQTQQQQTEPHTETPPNSSDSEEAEVEQQTTKPLPPLSENLHMPPQQHQVQESSSPVTIMDHVLDQDLSWSFMYTGLSQFQDPDLAFSKADDDLVGMFDDAGFEEDIDFLFSTDPGETESDINMSEVLGSIECGGTNGAGGSMVHVDNNQNKILSTFASSSPSSTTTTESRESLWLGI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 381 401 - -
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 221 276 - -
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 1 52 - -
Mupr3654g00005 401 FunFam AP2-like ethylene-responsive transcription factor 53 119 - -
Mupr3654g00005 401 ProSiteProfiles AP2/ERF domain profile. 54 117 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 Pfam AP2 domain 152 203 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 Pfam AP2 domain 54 109 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 SUPERFAMILY DNA-binding domain 152 213 IPR016177 GO:0003677
Mupr3654g00005 401 CDD AP2 53 118 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 ProSiteProfiles AP2/ERF domain profile. 153 211 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 38 52 - -
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 254 276 - -
Mupr3654g00005 401 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 271 - -
Mupr3654g00005 401 SUPERFAMILY DNA-binding domain 53 119 IPR016177 GO:0003677
Mupr3654g00005 401 PRINTS Ethylene responsive element binding protein signature 193 213 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 SMART rav1_2 153 217 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 SMART rav1_2 54 123 IPR001471 GO:0003700|GO:0006355
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 228 247 - -
Mupr3654g00005 401 MobiDBLite consensus disorder prediction 1 18 - -
Mupr3654g00005 401 Gene3D AP2/ERF domain 152 213 IPR036955 GO:0003700|GO:0006355
Mupr3654g00005 401 Gene3D AP2/ERF domain 54 119 IPR036955 GO:0003700|GO:0006355
Mupr3654g00005 401 FunFam AP2-like ethylene-responsive transcription factor 152 213 - -
Mupr3654g00005 401 CDD AP2 152 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3654g00005 Mupr-Chr3654 49304 55563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3654g00005 49 393 AP2-EREBP Transcription Factor Family AT5G57390 46.023 2.52e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr3654g00005 AP2 4.9e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3654g00005 - - gmx:100527432 613.994