Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3653g00001 ATGGGTGAAAAGAGTGGCGAAGAGAAAAAACATGATGATGCAAGCACGTCAGAGCATCCTGCAGAAACCAGCGCGAACGGGGAAAAGGAAGGAAAGAGCAAACAAAAGGAAAAACCTGAGACAGTTCCGTTTCACAAGCTGTTCGCTTTTGCAGACTCCACTGACATTCTGTTGATGGCTGTTGGGACCATTGGTGCCATTGGAAATGGCATGGGTTTGCCTCTCATGACATTACTGTTTGGTCAAATGATTAATAGCTTCGGTAGTAACCAGCAAAACACTGACGTCGTGAAAGAAGTGTCCAAGGTTTCTCTTAAATTTGTATACTTGGCAATAGGATCTGGGATGGCAGCATTTCTCCAGGTGAGTAGTTGGATGGTCACGGGAGAGAGACAGGCTGCACGAATAAGGGGATTGTATTTGAAAACTATTCTGAGACAAGATGTTGCGTTCTTTGATAAGGAAACAAACACTGGAGAGGTGGTAGGGAGGATGTCAGGTGACACTGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCAACGTTCATTGGGGGATTTGTGATAGCATTTATCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACTCTTCCACTTCTTGTTGTGTCAGGTGCTGCTATGGCGGTCATCATAGGCAGGATGGCTTCTCGGGGTCAAACAGCTTATGCAAAAGCTGCTCATGTAGTTGAACAGACAATTGGCTCAATAAGAACCTGCACTGATAATCGTATTTTCTTTCCATGTGTCTATTATCAGGTTGCTTCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGAGGCTTACAAATCAGGAGTTCATGAAGGCTTCATAGCTGGAGCTGGTCTAGGCACAGTTATGTTTGTTATTTTCGGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGTACGGTGATTAATGTGATTATTGCGGTGCTAACTGCTTCGATGTCTCTTGGACAGGCGTCCCCTAGCATGAGTGCTTTTGCTGCAGGTCAGGCTGCAGCTTACAAAATGTTTCAGACAATTGAAAGGAAGCCAGAGATAGATTCTTTTGATCCCAATGGAAAAATATTACAAGATATTCAAGGCGAAATAGAGTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAGGAACTGATATTTGATGGATTCTCTCTTCATATACCTAGTGGTATAACTGCAGCATTAGTTGGACAAAGTGGAAGTGGAAAGTCTACGGTTATCAGCTTGGTAGAAAGGTTCTATGATCCGAGGGCAGGTGAAGTTCTTATTGATGGCATTAACATGAAAGAATTTCAGCTTCGGTGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCGGTGTTGTTTGCATCTAGCATTAAAGATAACATTGCATATGGAAAAGAGGGAGCAACAATTGAAGAGATAAAATCTGCATCTGAACTTGCAAATGCTGCAAAATTCATTGATAAACTTCCACAGGGATTGAACACAATGGTTGGTGAGCATGGAACTCAGCTATCTGGTGGTCAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCGAGAATTCTACTTCTAGATGAAGCCACAAGTGCACTTGACGCAGAGTCTGAAAGGATAGTGCAAGAGGCTCTGGACAGAATCATGGTCAACAGAACTACTGTTGTAGTGGCACATCGCTTGAGCACAGTGAGGAATGCTGATATGATTGCTGTAATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACTCAGAATTGCTCAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGCCTACAAGAAACAAACAAGGAGTCAGAAGAAAATGCAGATCATCACAACAAGAGTGAACTTTCTGTAGAATCCTTTAGACAATCTAGTCAAAGGAGGTCACTTCAAAGATCTATTAGTAGGGGTTCATCCTTAGGGAATAGCAGCCGCCACTCATTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTCCCTGATTCTGAACATGAAAACTCACAACCCAAAGAGCAAGCACCAGAGGTTCCGCTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTGATTGGATGTGTAGCTGCCATAGGAAATGGTGTTATACTTCCAATATTTGGCGTGCTGATTTCCAGTGTCATCAAGACATTTTATGAACCATTTGATGAGATGAAAAAAGACTCCAAGTTTTGGGCAGTGATGTTTATGGTCCTTGGTCTTGCATCATTTCTGATAATTCCTGCACGAGGATACTTTTTTGCTGTGGCAGGATGTAAGTTAATCCAACGTATCAGGCTAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAAAACTCAAGTGGTGCCATTGGTGCAAGGCTTTCAGCAGATGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCTTTGGGACTATTGGTTCAAAATTTAGCATCTGCATTGGCGGGTTTGATTATTGCTTTCATTGCATCTTGGCAGCTGGCATTAATTATTCTTGTCTTGATTCCCCTGATTGGACTTAATGGATATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTTATGGAACTATACAGGAAGAAATGTGAGGGGCCAATGCAAACAGGGATACGGCAAGGGTTGATCAGCGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTCAGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTGGACGCTGGGAAGACAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCCTTAACTATGGCAGCTATTGGAATTTCCCAATCAAGCTCTTTTGCTCCTGACTCAAGCAAAGCAAAGTCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAGATCCGAGTGAAGAGTCTGGCACCACACTGGATAGCGTTAAGGGAGAGATTGAGCTTCGTCACGTGAGCTTCAAGTATCCATCTAGGCCTGACATACAGATTTTCCGAGACCTCAACTTGGCTATCCATTCTGGCAAGACGGTGGCTCTTGTTGGTGAAAGTGGAAGTGGCAAATCCACAGTGATTGCCTTGTTGCAAAGATTCTATGATCCTGATTCAGGGCAAATCACACTTGACGGGGTAGAAATTCGGGAGTTACAGCTCAAGTGGTTAAGGCAGCAAATGGGTCTTGTAAGCCAAGAGCCAGTATTGTTCAATGATACTATACGTGCCAATATTGCCTATGGAAAAGGAGGCAATGCTACTGAAGCAGAAATAATAGCTGCAGCAGAATTGGCCAATGCCCATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGACAGAAGCAACGGGTAGCAATTGCTCGTGCCATAATTAAAAGTCCAAAGATATTGCTGCTAGATGAGGCAACAAGTGCATTAGATGCCGAGTCAGAAAGAGTTGTTCAAGACGCATTGGACAAAGTCATGGTGAACAGGACCACAGTGGTTGTGGCACATCGTCTATCTACAATAAAAAATGCAGATGTGATTGCTGTTGTGAAAAACGGAGTTATAGTGGAGAAGGGAAAGCATGAAACACTCATTAACGTCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTTCAACTAAGTTCAACAGAACATCAATACCCAATATTTGTTTCCCTTTCCGT 3930 0.4305 MGEKSGEEKKHDDASTSEHPAETSANGEKEGKSKQKEKPETVPFHKLFAFADSTDILLMAVGTIGAIGNGMGLPLMTLLFGQMINSFGSNQQNTDVVKEVSKVSLKFVYLAIGSGMAAFLQVSSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFIKGWLLTVVMLSTLPLLVVSGAAMAVIIGRMASRGQTAYAKAAHVVEQTIGSIRTCTDNRIFFPCVYYQVASFTGEKQAVSSYSKFLVEAYKSGVHEGFIAGAGLGTVMFVIFGGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDSFDPNGKILQDIQGEIELRDVYFSYPARPEELIFDGFSLHIPSGITAALVGQSGSGKSTVISLVERFYDPRAGEVLIDGINMKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIKSASELANAAKFIDKLPQGLNTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQETNKESEENADHHNKSELSVESFRQSSQRRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVPDSEHENSQPKEQAPEVPLSRLASLNKPEIPVLLIGCVAAIGNGVILPIFGVLISSVIKTFYEPFDEMKKDSKFWAVMFMVLGLASFLIIPARGYFFAVAGCKLIQRIRLMCFEKVVNMEVGWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFIASWQLALIILVLIPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMQTGIRQGLISGSGFGVSFFLLFSVYATSFYAGARLVDAGKTTFSDVFRVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGIIDKKSKIDPSEESGTTLDSVKGEIELRHVSFKYPSRPDIQIFRDLNLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIRELQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIAAAELANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINVSGGFYASLVQLHTSASTKFNRTSIPNICFPFR 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3653g00001 1310 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 60 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3653g00001 1310 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1051 1288 IPR003439 GO:0005524
Mupr3653g00001 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1041 1288 IPR027417 -
Mupr3653g00001 1310 MobiDBLite consensus disorder prediction 1 39 - -
Mupr3653g00001 1310 FunFam ABC transporter B family member 9 46 392 - -
Mupr3653g00001 1310 FunFam ABC transporter B family member 1 1041 1291 - -
Mupr3653g00001 1310 Pfam ABC transporter transmembrane region 60 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3653g00001 1310 Pfam ABC transporter transmembrane region 729 1001 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3653g00001 1310 Pfam ABC transporter 1070 1219 IPR003439 GO:0005524
Mupr3653g00001 1310 Coils Coil 630 650 - -
Mupr3653g00001 1310 Gene3D ABC transporter type 1, transmembrane domain 105 1025 IPR036640 GO:0005524|GO:0016020
Mupr3653g00001 1310 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 396 632 IPR003439 GO:0005524
Mupr3653g00001 1310 CDD ABC_MTABC3_MDL1_MDL2 1051 1289 - -
Mupr3653g00001 1310 ProSitePatterns ABC transporters family signature. 1191 1205 IPR017871 GO:0005524|GO:0016887
Mupr3653g00001 1310 Pfam ABC transporter 415 563 IPR003439 GO:0005524
Mupr3653g00001 1310 SUPERFAMILY ABC transporter transmembrane region 717 1031 IPR036640 GO:0005524|GO:0016020
Mupr3653g00001 1310 FunFam ABC transporter B family member 1 386 635 - -
Mupr3653g00001 1310 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 730 1016 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr3653g00001 1310 MobiDBLite consensus disorder prediction 654 683 - -
Mupr3653g00001 1310 MobiDBLite consensus disorder prediction 637 653 - -
Mupr3653g00001 1310 Gene3D - 1041 1300 IPR027417 -
Mupr3653g00001 1310 Gene3D - 394 651 IPR027417 -
Mupr3653g00001 1310 FunFam ABC transporter B family member 9 1018 1040 - -
Mupr3653g00001 1310 FunFam ABC transporter B family member 1 709 1017 - -
Mupr3653g00001 1310 CDD ABC_MTABC3_MDL1_MDL2 396 634 - -
Mupr3653g00001 1310 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 357 - -
Mupr3653g00001 1310 MobiDBLite consensus disorder prediction 637 683 - -
Mupr3653g00001 1310 PANTHER ABC TRANSPORTER B FAMILY 22 636 IPR039421 -
Mupr3653g00001 1310 CDD ABC_6TM_Pgp_ABCB1_D2_like 719 1034 - -
Mupr3653g00001 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 634 IPR027417 -
Mupr3653g00001 1310 SMART AAA_5 1078 1271 IPR003593 GO:0016887
Mupr3653g00001 1310 SMART AAA_5 423 609 IPR003593 GO:0016887
Mupr3653g00001 1310 SUPERFAMILY ABC transporter transmembrane region 40 380 IPR036640 GO:0005524|GO:0016020
Mupr3653g00001 1310 ProSitePatterns ABC transporters family signature. 535 549 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3653g00001 Mupr-Chr3653 15106 20652 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3653g00001 35 1296 Calmodulin-binding Proteins AT2G36910 44.714 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3653g00001 K05658 - gmx:100800034 2220.66