Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3647g00005 ATGGATCTTCTGTGCAACGCGTATTCGAATGCCTCAGACGACGACGAGGAGGAACAACCGAAACGAGAGAGAGTATCAGTCTCTTCCTCTAACCCACCAAAACGGCATCTTCCTTTGTTCGACCTCCAAATGCAAGCTCCCATTCCCGGAAGATACATTTCTAAACGACAACGCGCATCGATGGGTCCCGCCTCTGCCTCTCTTCCTGACCCCGTCCCTGTTCCGTCTCCTTTCACGCTATCTGAGACAACTACTCTGACCTTTTTCTTGTTTGTAAACTTAGGGAGTATCTCGGATGCTGATATACACCATAGTATTTTATCATTGTTGAAAAGTAAAGCAAAGGGTCATCAAAGTGCAAACCTGATATCTGAAAAGCTATCTGCAACTCTACACGGACATATAAAAGCTGTCAATGCTATACATTGGTCGTCAACTCATGCTCACCTCCTTGCATCTGCTGGGATGGATCATACGGTTTGCATATGGAATGTATGGAGCAGAAATGAGAAGAAAGCACGTGTGCTAAACTTCCACAATGCAGCAGTCAAAGATGTGAAATGGTCTCATCAAGGGCACTTTCTACTTTCTTGTGGATATGATTGCACATCAAGGTTGATCGATATTGAAAATGGATTGGAGACTCAGGTTTTCAGAGAAGATCAAATTGTTGGAGTTATCAAGTTCCATCCCGACAATTCAAATCTCTTCCTTTCTGGAGGGTCAAAGGGCCATATCAAACTATGGGATGTCAGAACTGGCGAAGTAGTGCATAATTATAATCGAAATTTAGGTTCGATTCTGGATGTTGAGTTTACAATGAATGGGAAACAATTCATTTCTTCTAGTGATGTATCTCGGAGTAATGTCAGTGAGAATGCTATTATCGTTTGGGATGTGTCAAGACAGGTGCCATTGTCTAATCAGGCTCTGGGTTCTCCCACTACAATAGTTAGCTTTTGTGGTCTGGTTCTCTTAAGGTTCCTATCAATTGGTATCAAAGCCTTCCACCATTGTTTGCTCGAAACTAGTCAAAGGGCTAGTGCACAGTCAGCCTGCAAGGGCGTTGTGGTTGTGGAATGTGGTGAGATGTTAGGATCCAATTGCATGCGTATTGTGCTCCTGAATCAGGTTTATGCGGAAGCTTATACATGTCCTTGCGTGAGGCGCCACCCATTCGATTCAATTTTTGTTGCCCAATCAAATGGGAATTATGTTGCAATCTTTACTACCACCCCGCCTTACAGACTCAACAAATATATGCGATATGAGAGCCATGCGGTCTCTGGGTTCCCAATCAAGTGCAATTTCAGCTTGGATGGGAAAAAACTTGCTTCTGGCTCTTCAGATGGTTCTATCTACCTTTATGATTATCACTCATCCAAAGTTGTGAAGAAAATCAAAGCCCATGACCAAGCATGCATAGATGTTGCCTTCCACCCCGTTATACCAAATGTTATTGCTTCATGCTCATGGGATGGAAGTATTTTG 1491 0.4326 MDLLCNAYSNASDDDEEEQPKRERVSVSSSNPPKRHLPLFDLQMQAPIPGRYISKRQRASMGPASASLPDPVPVPSPFTLSETTTLTFFLFVNLGSISDADIHHSILSLLKSKAKGHQSANLISEKLSATLHGHIKAVNAIHWSSTHAHLLASAGMDHTVCIWNVWSRNEKKARVLNFHNAAVKDVKWSHQGHFLLSCGYDCTSRLIDIENGLETQVFREDQIVGVIKFHPDNSNLFLSGGSKGHIKLWDVRTGEVVHNYNRNLGSILDVEFTMNGKQFISSSDVSRSNVSENAIIVWDVSRQVPLSNQALGSPTTIVSFCGLVLLRFLSIGIKAFHHCLLETSQRASAQSACKGVVVVECGEMLGSNCMRIVLLNQVYAEAYTCPCVRRHPFDSIFVAQSNGNYVAIFTTTPPYRLNKYMRYESHAVSGFPIKCNFSLDGKKLASGSSDGSIYLYDYHSSKVVKKIKAHDQACIDVAFHPVIPNVIASCSWDGSIL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3647g00005 497 Gene3D - 107 324 IPR015943 GO:0005515
Mupr3647g00005 497 Gene3D - 368 497 IPR015943 GO:0005515
Mupr3647g00005 497 ProSitePatterns Trp-Asp (WD) repeats signature. 151 165 IPR019775 -
Mupr3647g00005 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 131 173 IPR001680 GO:0005515
Mupr3647g00005 497 MobiDBLite consensus disorder prediction 1 38 - -
Mupr3647g00005 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 176 217 IPR001680 GO:0005515
Mupr3647g00005 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 217 259 IPR001680 GO:0005515
Mupr3647g00005 497 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 131 165 - -
Mupr3647g00005 497 SMART WD40_4 124 164 IPR001680 GO:0005515
Mupr3647g00005 497 SMART WD40_4 460 495 IPR001680 GO:0005515
Mupr3647g00005 497 SMART WD40_4 169 208 IPR001680 GO:0005515
Mupr3647g00005 497 SMART WD40_4 253 299 IPR001680 GO:0005515
Mupr3647g00005 497 SMART WD40_4 211 250 IPR001680 GO:0005515
Mupr3647g00005 497 SMART WD40_4 418 457 IPR001680 GO:0005515
Mupr3647g00005 497 Pfam WD domain, G-beta repeat 424 457 IPR001680 GO:0005515
Mupr3647g00005 497 Pfam WD domain, G-beta repeat 126 164 IPR001680 GO:0005515
Mupr3647g00005 497 Pfam WD domain, G-beta repeat 173 207 IPR001680 GO:0005515
Mupr3647g00005 497 Pfam WD domain, G-beta repeat 227 250 IPR001680 GO:0005515
Mupr3647g00005 497 ProSiteProfiles Trp-Asp (WD) repeats profile. 437 466 IPR001680 GO:0005515
Mupr3647g00005 497 SUPERFAMILY WD40 repeat-like 122 496 IPR036322 GO:0005515
Mupr3647g00005 497 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 18 309 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3647g00005 124 302 U-box Gene Family AT2G33340 26.776 1.31e-09 58.5