Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3636g00003 ATGACAGAGAGAAAAGGCCGAGTATTCAGCGAGGAAATAAAAGCCCACGAAGCTAAACCCACCAGATCAGATAGAAAAGGCCGAATATTCAGCGAAGAAATAAAAGCCCACAAAGGTAAACCCACCAGGATGGACAAAGAGGCGGCAAAACCGTTACTTCCACATTCGGTGTTGGTGAAGAAGATTAGGGACGAGGATTGGGATTCGGATAAATACCAAAAGCAGGTAGTCGCAAAAGCGAAGAGGCTCCGAACACGGAAAGTGATTTTTAGCAGAGCCAAACAGTACGTAAAGGAATACGACGAGCAGCAAAAGGAACTGATTAGGTTGAAGCGTGAAGCCAAGCTCAAGGGAGGGTTTTATGTGGACCCCGAAGCTAAGCTGTTGTTCGTTATCAGGATCCGTGGTATCAATGCCATGCATCCTAAAACAAGGAAGATTTTGCAGCTTCTGCGATTGAGACAGATATTTAATGGCATCTTTCTTAAAGTTAACAAAGCAACCATGAATATGCTGCACAGGGTAGAGCCTTATGTTACCTATGGGTACCCTAATTTGAAGAGTGTAAGAGAATTGATCTACAAGAGGGGATATGGAAAAGTTAACAAGCAGAGAATTGCTTTGACAGACAACTCCATTGTTGAACAGAGTTTGGGGAAGCATGAAATCGTTTGCGTTGAAGATCTGATCCATGAGATTATGACTGTTGGACCTCACTTCAGGGAGGCAAACAATTTTCTATGGCCTTTCAAGCTCAAAGCTCCCCTGGGAGGTTTGGAGAAGAAAAGAAATCATTATGTTGAAGGAGGTGACGCTGGCAACAGGGAAGATTACATAAATGAGCTTATTAGAAGGATGAATTAG 864 0.4317 MTERKGRVFSEEIKAHEAKPTRSDRKGRIFSEEIKAHKGKPTRMDKEAAKPLLPHSVLVKKIRDEDWDSDKYQKQVVAKAKRLRTRKVIFSRAKQYVKEYDEQQKELIRLKREAKLKGGFYVDPEAKLLFVIRIRGINAMHPKTRKILQLLRLRQIFNGIFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVNKQRIALTDNSIVEQSLGKHEIVCVEDLIHEIMTVGPHFREANNFLWPFKLKAPLGGLEKKRNHYVEGGDAGNREDYINELIRRMN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3636g00003 287 Pfam Ribosomal protein L30p/L7e 129 179 IPR016082 -
Mupr3636g00003 287 Coils Coil 93 117 - -
Mupr3636g00003 287 NCBIfam 60S ribosomal protein uL30 57 287 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mupr3636g00003 287 Gene3D - 128 233 IPR036919 -
Mupr3636g00003 287 Gene3D - 234 287 IPR036919 -
Mupr3636g00003 287 Pfam Ribosomal L30 N-terminal domain 54 124 IPR012988 -
Mupr3636g00003 287 PANTHER 60S RIBOSOMAL PROTEIN L7 52 287 IPR039699 -
Mupr3636g00003 287 FunFam 60S ribosomal protein L7 128 232 - -
Mupr3636g00003 287 ProSitePatterns Ribosomal protein L30 signature. 147 179 IPR018038 -
Mupr3636g00003 287 FunFam 60S ribosomal protein L7 233 287 - -
Mupr3636g00003 287 CDD Ribosomal_L7_archeal_euk 128 287 IPR035808 -
Mupr3636g00003 287 MobiDBLite consensus disorder prediction 1 46 - -
Mupr3636g00003 287 SUPERFAMILY Ribosomal protein L30p/L7e 128 287 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3636g00003 Mupr-Chr3636 8847 11456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3636g00003 49 287 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 78.661 3.14e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3636g00003 K02937 - gmx:100306213 408.683