Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3629g00002 ATGATTTCATTGGTTGCCAGTTGTAGCAATCAAATGTCTCCTTCAGTTTCTTGCCAAGAAAAAGGAAGTAGAAACAAGAGAAAATTCAGGGCTGATCCACCTCTAGGGGAGCCAAGTAAGATCTTTCCTGCACCTCAACTTGAGGACTTCAGCTATGAATGCTATGAATTCTCTGCCGAGAAGTTTGAAATAACCCCAGGTCATGGAAAAGCAGCAGCTTGTGACCTGTGTAGTGTAAACCAAGATCATTCTGATGGACTGAAGCTTCGCCTTGGATTGTATAGTCCCGGAACATCTGAGGTTGGGCCTAGTCAATCCAAGGAAGAACCTGAGACAGATGAAGTTAACGATGCAGATTGGAGTGATCTCACAGAAGCCCAGCTGGAAGAACTTGTCCTGAGTAATTTGGACACCATTTTCAAGAGTGCAATAAAAAAAATTGTAGCATGTGGCTACACTGAAGAAGTTGCTACTAAGGCCATGTTAAGACCTGGTATCTGTTATGGATGTAAAGATACCGTGCCTAATATTGTTGATAATACTTTAGCATTTCTTAGAAATGGCCAAGAGATTGATACTTCACGAGAATACTATTTTGAAGATTTAGTGCAGCTTGAGAAGTATGTGTTGGCTGAATTGGTTTGTGTTCTTCGAGAGGTTAGGCCATTCTTCAGTGTTGGGGATGCAATGTGGTGTTTGTTGATTTGCGACATGAATGTGTCACATGCTTGTGCAATGGATTGTGACCCTTTAAGTAGTTTAAGTATTGATAATACTGCAAATAGTTGTTCATCTAGCCAAGCAGAATCACGATCAAAAGCAGAAACCAAAATTCCTGAATTGAGTCTTCTAAGTCCTGGCAAATCAATTCCTGCAGGTTCTCATAATTCTCAATCGAAGAAACCCTTTGTGACTGGAATTACTGGTGTGAACAACTTGAATTCTCAAATTATTGGTGGATCCTCAGAGAATGAGGGCCCCGGTTGCAGATATGATTGCATTGATAAAACATTCAGCACTGCAGTAACATCTCAATCTCCCCTGATGGAAGAAAAGTGTGGAACTGTTAGAAAGGTCCATTCTGGTAGCAGCAAGAGGGACTACTTTCTTCGACACAAGTCATTTCATGTAGATAAAACTCATCGTACTTATGGATCAAAAGGGTCTTCAAGAGGAGGGAAGCTGAATGGCTTGAGTGGTTTAATCTTGGATAAAAAACTTAAATCTGTCTCAGAATCTTCTACCATAAACTTAAAGAGTGCATCCTTACAGATAAATAAAACAATGGGTGTTGATATGACTCAAGACAATATTAATGCCAATTTCTCATGTAATGCTGGAACTTCAACCCCCACTGCATTCAGCCTGGATTCTTCTGATTCTGTTTTTAGATCAACTAATACTTCATATGCAGTACATGCAGCAAATACTATACCCGTATTCAGTAGTCCAGCTTCACTATCAGCTACAGATACAGACCTTTCTCTCTCATTGTCTTCAAAAATCAAGCCATGTACTGAACCTGTCAGGCGCAATAACGAGGCACCTAATAGTAGTTATATGGGGATATCATTTGATAAGTCCCTGAGACAGTGGATACCCCAGGATGGAAAGGATGAGATGATTTTGAAGCTGGTTACAAGGGTTCGGGAGCTGCAAAATCAGACTCAAGAATGGACAGAGTGGGCCAATCAGAAGGTTATGCAAGCTGCTCGTCGACTGAGTAAGGACAAGGCTGAGCTTCAGACACTTAGGCAAGAGAAAGAGGAAGTGGAACGTCTCAAGAAAGAGAAGCAATCTCTGGAGGAAAATACCTTAAAGAAGCTTGCTGAGATGGAAAATGCCTTGTGTAAAGTTAGTGGGCAGGTAGAGCGAGCTAACGCCACTGTCCAGAAGCTTGAGGTGGAGAGGGCTGCACTGAGTACAGAGATGGAGTCTGCTAAGCTACGGGCTACAGAAACTGCTGCAAGCTGTCAAGAGGTCTCGAGCAGAGAAAAGAAGACACAAATGAAGTTTCAGTCATGGGAAAAGCAGAAATCCTTGTTTCAGGAAGAGCTAATAATTGAAAAGCGAAAATTGGCACAACTGCTGCAGGAATTGGAACAAGCCAGAATGCAACGGGAGCAAGTTGAGGGTAAATGGCAGCAGGAAGCAAAGGCAAAAGAAGAGCTTCTTCTACAGGCCAGTTCTATAAGAAAGGAAAGGGAACAGATTGAGGAATCAGGAAAATCGAAGGAGGACATGATCAAATTAAAAGCTGAGAGGAATCTGCAAAGATACAGAGATGACATCCAAATACTTGAAAAGGAAATTGCCCAACTAAGACTGAAGACTGACTCTTCAAAAATTGCTGCACTGAGGATGGGCATTGATGGAAACTACGCCAGCAGATGCTTGGACATGAAAAATGGGACTGCTCAGGAGGAGCCCCGGACTTCATTCATCTCAGAACTAGTCGTTGATCACTCAGTGACAGGTGGGGTGAAACGAGAACGGGAATGTGTGATGTGCCTTTCAGAGGAAATGTCTGTTGTATTCCTCCCATGTGCTCATCAGGTTGTTTGCACAACATGTAACGATCTCCATGAGAAGCAGGGTATGCAAGATTGTCCTTCTTGCAGGAGCCTCATCCAGCAGCGTATTGCTGTGCGCTTTCCACGCACTTGA 2667 0.4263 MISLVASCSNQMSPSVSCQEKGSRNKRKFRADPPLGEPSKIFPAPQLEDFSYECYEFSAEKFEITPGHGKAAACDLCSVNQDHSDGLKLRLGLYSPGTSEVGPSQSKEEPETDEVNDADWSDLTEAQLEELVLSNLDTIFKSAIKKIVACGYTEEVATKAMLRPGICYGCKDTVPNIVDNTLAFLRNGQEIDTSREYYFEDLVQLEKYVLAELVCVLREVRPFFSVGDAMWCLLICDMNVSHACAMDCDPLSSLSIDNTANSCSSSQAESRSKAETKIPELSLLSPGKSIPAGSHNSQSKKPFVTGITGVNNLNSQIIGGSSENEGPGCRYDCIDKTFSTAVTSQSPLMEEKCGTVRKVHSGSSKRDYFLRHKSFHVDKTHRTYGSKGSSRGGKLNGLSGLILDKKLKSVSESSTINLKSASLQINKTMGVDMTQDNINANFSCNAGTSTPTAFSLDSSDSVFRSTNTSYAVHAANTIPVFSSPASLSATDTDLSLSLSSKIKPCTEPVRRNNEAPNSSYMGISFDKSLRQWIPQDGKDEMILKLVTRVRELQNQTQEWTEWANQKVMQAARRLSKDKAELQTLRQEKEEVERLKKEKQSLEENTLKKLAEMENALCKVSGQVERANATVQKLEVERAALSTEMESAKLRATETAASCQEVSSREKKTQMKFQSWEKQKSLFQEELIIEKRKLAQLLQELEQARMQREQVEGKWQQEAKAKEELLLQASSIRKEREQIEESGKSKEDMIKLKAERNLQRYRDDIQILEKEIAQLRLKTDSSKIAALRMGIDGNYASRCLDMKNGTAQEEPRTSFISELVVDHSVTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNDLHEKQGMQDCPSCRSLIQQRIAVRFPRT 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3629g00002 888 MobiDBLite consensus disorder prediction 1 42 - -
Mupr3629g00002 888 MobiDBLite consensus disorder prediction 1 20 - -
Mupr3629g00002 888 Coils Coil 721 741 - -
Mupr3629g00002 888 Coils Coil 567 611 - -
Mupr3629g00002 888 Coils Coil 623 650 - -
Mupr3629g00002 888 Coils Coil 750 777 - -
Mupr3629g00002 888 ProSiteProfiles Zinc finger RING-type profile. 834 874 IPR001841 -
Mupr3629g00002 888 PANTHER OS05G0141500 PROTEIN 11 883 IPR046934 -
Mupr3629g00002 888 CDD RING-HC_MIP1-like 829 883 - -
Mupr3629g00002 888 Pfam Zinc finger, C3HC4 type (RING finger) 831 879 - -
Mupr3629g00002 888 SUPERFAMILY RING/U-box 829 881 - -
Mupr3629g00002 888 Coils Coil 683 713 - -
Mupr3629g00002 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 824 884 IPR013083 -
Mupr3629g00002 888 Pfam Family of unknown function (DUF6592) 135 246 IPR046527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3629g00002 Mupr-Chr3629 8923 12710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3629g00002 834 883 C3H Transcription Factor Family AT1G73950 44.000 7.85e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3629g00002 - - gsj:114420104 1429.08