Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3625g00001 ATGGACGAGTCATTGGAAAAATGGCTTTCTTATGTGGAAAGTGAGGAGTGCCATTTATTCAATGAAGTTGACATGATGGAAGAGTTCAAGCTGGGAGAGAATTCGGTGCAGCCAGAACTATGTTTGGAGCAGAACATTACTAGTCTCATACAACATGCTCCTTCAGAGAAACTTCACTTCTCATCCTACAATCTCTCTTTTGAGGACTCCATTGAAGTGCCGTATGTAATTCCCAAGGAAACATGCCAACAATATGGTGAACATTCAAAGAGGATCCATGAAGAAGCAGACAATGGAAAATCCAAGAGGGGTAGAAGCTTCTCTCAGAATCAAGATCATATATTGGCTGAGAGAAAGAGGAGAGAGAATCTTGCCTGCATGTTTGTAGCACTTTCTGCCATGATTCCGGGCTTGAAAAAGATGGACAAGCTGACTATCCTTAGCAATGCTATTGATCATGTAAAATATCTTCAGAAGCGTGTAAAAGATTTGGAGGAGCAGAACAAGAGAGAGATAGATCAACCCATTGTATGCTTCAAAATGAACAATGTTTGTGCCGTTGCTGATGATGTTTCATGTACCTCTCATGATAGACCTATCAAAATATGTCCTAAAGTTGAAGCAAGAGTCTCAGCAAAAGATGTACTCATCAGAGTTTTGTGTGAGAAACAAAAGAATATATTACCTAAGATATTGGCCAAGCTTAAATCTCACAATCTCTCCATAGTTTGCAGCAATGTTTTGCCTTTTGGGAATTCTGCTCTCAACATTACCAGCGTTGCTCAGGTACACACTAATATTATATGTTGGAAGATTTTAACTTCAGCTTTAGTACTGATTTTAAGTAATTAA 852 0.3873 MDESLEKWLSYVESEECHLFNEVDMMEEFKLGENSVQPELCLEQNITSLIQHAPSEKLHFSSYNLSFEDSIEVPYVIPKETCQQYGEHSKRIHEEADNGKSKRGRSFSQNQDHILAERKRRENLACMFVALSAMIPGLKKMDKLTILSNAIDHVKYLQKRVKDLEEQNKREIDQPIVCFKMNNVCAVADDVSCTSHDRPIKICPKVEARVSAKDVLIRVLCEKQKNILPKILAKLKSHNLSIVCSNVLPFGNSALNITSVAQVHTNIICWKILTSALVLILSN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3625g00001 283 MobiDBLite consensus disorder prediction 87 102 - -
Mupr3625g00001 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 169 IPR036638 GO:0046983
Mupr3625g00001 283 MobiDBLite consensus disorder prediction 87 110 - -
Mupr3625g00001 283 Gene3D - 108 175 IPR036638 GO:0046983
Mupr3625g00001 283 PANTHER BHLH TRANSCRIPTION FACTOR 51 266 - -
Mupr3625g00001 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Mupr3625g00001 283 Coils Coil 147 174 - -
Mupr3625g00001 283 Pfam Helix-loop-helix DNA-binding domain 111 158 IPR011598 GO:0046983
Mupr3625g00001 283 SMART finulus 114 163 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3625g00001 Mupr-Chr3625 672 3333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3625g00001 36 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.224 7.85e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr3625g00001 HLH 1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3625g00001 - - gmx:100783561 266.544