Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3622g00004 ATGTCAAACTCAAACATCACAAGTTGTGATAGTTGGAGCTTCTCTACAGAGAATAATACTGGAGAAGATGCAGCTGTTAAACAGCAATTAGAGATGCTTGGCCAGCTCCATAGTCCAAATTCAAACACTTCAACCACAACAAATAATAGCAATGCCGAAAACACAAATTCACAACCACCTGTTAAGAAGAAAAGGAACCTCCCAGGAAATCCAGATCCAAGTGCCGAAGTCATAGCTCTATCGCCAAACACCCTGGTGGCCACAAATCGGTTCATATGTGAAATATGCAGCAAAGGGTTTCAAAGAGATCAAAACCTTCAATTGCACCGTCGAGGCCATAACCTGCCGTGGAAGCTGAAACTGAGAACTAGCACAGAAGTTCGAAAACGCGTTTATGTTTGTCCCGAACCCTCGTGTGTGCACCACAACCCAGCTCGAGCACTGGGCGATCTTACAGGCATTAAAAAGCACTTCAGCAGAAAGCACGGCGAGAAGAAGTGGAAATGTGACAAGTGCTCAAAGAAATATGCTGTTCAGTCTGACTGGAAAGCCCATTCAAAAGTGTGTGGAACAAAGGAATACAAATGTGACTGTGGCACCATCTTTTCCAGAAGAGACAGCTTCATCACCCACAGAGCTTTCTGCGATGCACTGAGTGAGGAGAACAACAAATTCAACGAAGGACAACAATTGTCATCAAATATGCACAGTTCAAACATGCAACAACCAATAATCCCAAACCTAGTTGCATCATTACCAATCAATACCAATAATCACAAGCACGTGCACCCATTATCACTCCCTCACGACCTCGTGATGACAATGCCCGCAAAACCCTTTAACAGCAACATGGCTGCATTCACGAGAAGCCTCTCTTCTCCCTCTCAACTAAGCTCAACTTCACCAAACATTATGTTCGAGGAAAATGCTCTGCACTCACCTCACATGTCCGCCACAGCATTGCTCCAAAAAGCTGCACAAATGAGCGCAACAGTGAATAGTAACAGCAGCGTGATCACCGAAAAAAGTTTTGTGACAAGCATGGCACCGCCATCATATGGGGTCATGAACCATGACGTGCACGATGATGGTCAACAAGACTTGTCTCATTATAATTTCAATGGGATTGATGGTGGTGGCATGGGAATGAGCGGTTTGGATATGTTTAATGTTATATTGGATCAAAGTAAGGCCTTGTCGAAGATCATAGAGCAGAACAACCGAAGCAATAGTAATGGTGTTAATTTGCATGCAATGAATGGTAGGTCAAGTGGTTCCATTAAAGGGAGTGAGGATGTGATGACTTTGGACTTTTTGGGGATAGGAGTTGGTGGTGGTGGTGATGGCAATTTCTATGATGGTGATGAACAGTCAGAAATGGCTGCTAGAGATGAAATATGGAGAAATTGGTCAAATAAGAATGCAGGGTTTGAATCATTTTCAGCAGCAAACATCAGCATATTGCCCGGGAGGGAAGAATAA 1482 0.4372 MSNSNITSCDSWSFSTENNTGEDAAVKQQLEMLGQLHSPNSNTSTTTNNSNAENTNSQPPVKKKRNLPGNPDPSAEVIALSPNTLVATNRFICEICSKGFQRDQNLQLHRRGHNLPWKLKLRTSTEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKVCGTKEYKCDCGTIFSRRDSFITHRAFCDALSEENNKFNEGQQLSSNMHSSNMQQPIIPNLVASLPINTNNHKHVHPLSLPHDLVMTMPAKPFNSNMAAFTRSLSSPSQLSSTSPNIMFEENALHSPHMSATALLQKAAQMSATVNSNSSVITEKSFVTSMAPPSYGVMNHDVHDDGQQDLSHYNFNGIDGGGMGMSGLDMFNVILDQSKALSKIIEQNNRSNSNGVNLHAMNGRSSGSIKGSEDVMTLDFLGIGVGGGGDGNFYDGDEQSEMAARDEIWRNWSNKNAGFESFSAANISILPGREE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3622g00004 493 FunFam protein indeterminate-domain 12-like 70 138 - -
Mupr3622g00004 493 MobiDBLite consensus disorder prediction 1 74 - -
Mupr3622g00004 493 Gene3D Classic Zinc Finger 88 188 - -
Mupr3622g00004 493 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 113 IPR013087 -
Mupr3622g00004 493 MobiDBLite consensus disorder prediction 33 63 - -
Mupr3622g00004 493 SMART c2h2final6 167 187 IPR013087 -
Mupr3622g00004 493 SMART c2h2final6 91 113 IPR013087 -
Mupr3622g00004 493 SMART c2h2final6 132 162 IPR013087 -
Mupr3622g00004 493 SUPERFAMILY beta-beta-alpha zinc fingers 90 187 IPR036236 -
Mupr3622g00004 493 MobiDBLite consensus disorder prediction 1 25 - -
Mupr3622g00004 493 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mupr3622g00004 493 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 42 458 IPR031140 -
Mupr3622g00004 493 FunFam protein indeterminate-domain 5, chloroplastic-like 145 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3622g00004 Mupr-Chr3622 50107 53782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3622g00004 40 358 IDZ Gene Family AT3G50700 51.099 7.85e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr3622g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3622g00004 - - gmx:100776872 726.857