Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3620g00001 ATGGAAAGAATGTTCCCTCCTAAGAAGCCTTCAACTATGAATTCCCATGACAGACCCATGTGTGGCCAAGGGGACTCAGGGCTTGTCCTCACCACAGACCCAAAGCCACGCCTCCGTTGGACTGTTGAACTTCATGAACGCTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTCACTCTTTACCACCTCAAGAGCCACCTTCAGAAATTCAGGCTTGGAAAGCAGCCCCACAAGGATTTCAATGAGCACTCGATTAAGGATGGCATGAGAACTTCGGCTTTAGAACTTCAACGAAATATTGGCTCCTCTTCTGCTATGATTGGCCGCAACATGAACGAGATGCAAATGGAGGTGCAGAGAAGATTGCATGAACAACTAGAGGTTCAAAAAAACCTTCAGCTGAGGATCGAGGCTCAAGGGAAATACATGCAAAACATATTGGAGAAGGCTTGTCACACACTTGCAGGTGAAAACATGGCCACAAAAGGTATTGGAGCTCCTCAAGGCACCCCTGACATGGGGGTCATGAAAGAATTTGGTTCTCTCAATTTCCCTTCTTTTCAAGATCTTAACATTTATGGCAACGGTGACCAACTTGATGGGTTTATGCCACCTAGTAATGAGACTTTATTTGTGGAGAAGAAGAGGCCTTGCCCCTATAGTGGAAGTGGAAAGAGTCCATTGATTTGGAATGATGATTTGAGGCTTCAAGATTTGGGAACGGCTTCATCATGCCTTAGCCCTCAAGATGACCCTTTCAAAGGTGATCACAAGGTTCAGATTTCACCACCGTCGATGGATAGTGATCCCATGTCGGAGATCTATGACACAAAGTCAGTGGTACTCCATGGAGAAAGTGTGGGTGATGTGAACAAATTTGATGCATCTTTGAAGATAGAAAGGTCATCGCCAAAAAGATCACCACTTCAGCCAGAAAGGACGAGTCCTATGATCAATGTTGGTTCCGTGGCACAAGGTAGAAGCTCCCCATTTGGTTGA 1050 0.4581 MERMFPPKKPSTMNSHDRPMCGQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNEHSIKDGMRTSALELQRNIGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQNILEKACHTLAGENMATKGIGAPQGTPDMGVMKEFGSLNFPSFQDLNIYGNGDQLDGFMPPSNETLFVEKKRPCPYSGSGKSPLIWNDDLRLQDLGTASSCLSPQDDPFKGDHKVQISPPSMDSDPMSEIYDTKSVVLHGESVGDVNKFDASLKIERSSPKRSPLQPERTSPMINVGSVAQGRSSPFG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3620g00001 349 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Mupr3620g00001 349 MobiDBLite consensus disorder prediction 262 287 - -
Mupr3620g00001 349 Pfam MYB-CC type transfactor, LHEQLE motif 131 169 IPR025756 -
Mupr3620g00001 349 MobiDBLite consensus disorder prediction 1 29 - -
Mupr3620g00001 349 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Mupr3620g00001 349 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 202 IPR044848 GO:0003700
Mupr3620g00001 349 FunFam Myb family transcription factor 34 92 - -
Mupr3620g00001 349 Gene3D - 34 92 - -
Mupr3620g00001 349 MobiDBLite consensus disorder prediction 315 349 - -
Mupr3620g00001 349 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Mupr3620g00001 349 MobiDBLite consensus disorder prediction 325 349 - -
Mupr3620g00001 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3620g00001 Mupr-Chr3620 2783 5630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3620g00001 4 349 G2-like Transcription Factor Family AT1G79430 55.497 1.10e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr3620g00001 Myb_DNA-binding 4.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3620g00001 - - gmx:100796268 627.476