Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3605g00001 ATGGCGACGCCGCTGCAGCACATGGACAGCGGCGGAGGAGTGGCGGTGCTGTCGAATCCGGTGAGCAAGGTGGATTCCTCCGCCAATGGCGGCGGCGGGTTCAGCCGGTCGCTGTCGGAATCGCCAATTCTGATATTCTCGTTCTTCCACAAAGCGATTCGGAACGAGCTCGACGCGCTGCACCGATTGGCGATGGCGTTCGCCACCGGAAACTGCTCCGACATCCAGCCCCTCTTCCAACGCTACCATTTTCTCAGATCGATGTACAGACACCACTCCAATGCCGAAGATGAGGTGCAAGTTTCGGAACCATTATTCCCTGTTCTTAATTTTATCCTCAATTTGGTGATTTTTCCAGCTCTAGATATACGTGTGAAGAATGTAGCACAGACATATTCCCTAGAGCACCAGGGTGAAAGTGATCTTTTTGATCATCTATTTGAGCTGTTAAACTCTTCCATCCATAATGATGAAAGTTTCCCAAAGGAGTTAGCATCCTGCACAGGAGCTCTGCAGACGTCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTACTTATTGAGAAGTTCTCTCTCGAGGAACAGGCATCTTTAGTTTGGCAGTTTCTCTGCAGCATTCCTGTGAATATGATGACAGAATTTCTTCCATGGCTTTCAACATCTATATCACCTGATGAACCTCAAGATTTGCGGAAGTGCTTAAGCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACATGGATGGAAGGGAGAAGTAGTGCTAGCACAGTCGAAAATTGTGTAGATCAATCTCAGGTGCGATGTAGTCCTAATCCTTTAACCCAACAGAATGGGAAAATAAAATGTGCATGTGAGTCCACTGCAACTGGGAAAAGGAAATATTCTGGATCTAGCGTAGATGTTTCTGATACCATGAGAACACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAATGAGTTAAATGAGATAGCAGCACAGACCAGAAAGATACAACTCTCTGGAGATTTTACTAATCTATCAGCTTTCAATGAACGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAAAATTTTCTTTCTTTCAAGAGCACGCTGAAGAAGAAAGCCAATTTAATGACTTCCGGTCTTTGATTGAAAGTATTCAAAGTGAAGGAGCAACATCTAGTTCGGAAACTGAATTTTATTCCACATTGTGTTCACATGCTGATCTTATATTGGAAACAATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCACGGAAGCACTTTAGCTTCAAAAGGCAACGTGAACTTCTATATCAAAGCTTATGCATGATGCCTTTGAAATTGATCGAGCGTGTTCTGCCATGGTTGATTGGGTCATTAACTGAAGATGAAGCACAAATGTTTTTGAAAAACATGCAATTGGCAGATGACTTGTGTCAATTTGTTCCAGCTCCAGCAATAGATTCTGCTTTAGTCACACTTTTCTCCGGTTGGGCTTGTAAGGCGCGTAAAGATGGCCTGTGTTTGTCTTCAAGTGCATCAGGCTGCTGTCCTGCCCAGAGATTTACTGATATTGAAGAAAATATTGTTCAATCTTCCTGTACTTCTGCCTCTGTGTTGTCTGGTAGAGATTGCTCGGTATTTTCTGAATCAGATGGGACCCAACAAAGATCAGTCAAGCGAAACATATCGGAGGAGCACAAGAATGAAGATGTCTCTAAAACATCAGAAAGGGTAAGCATTCAGAAACAATGTTGTAGTGCCCGATCTTGTTGTGTGCCGGCTTTAGGAGTCAGCAGGAACAATTTGGGGCTGGGTTCACACTCTACAACCAAGTCCTTACGTTCCTTGTCTTTCACAGCTTCTGCCCCGTCGCTTAATTCTAGTCTTTTCATATGGGAAATAGACAACAGCTCATGTGATGTTGGCTCTATAGAAAGACCAATTGATACCATATTTAAATTCCATAAAGCCATACGCAAAGACTTGGAGTATTTAGATGTTGAGTCTGGAAAGCTTTGTGATGGTGATGAAACAATTATTCGGCAATTTAGTGGAAGATTCCGGCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCACTTGAATCCAAAGAGGCACTTCATAATGTGAGCCATTCTTACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAGGATATGTCATGCGTTCTTTCTGACCTTTCTGTCCTTCATGAAGACTTGCAGAGGACCCATATGTCAGCAGATATAAGTGAAAGTAATTTTGGAATTTCTGATGCCAATGATAGTAATAATATAAAAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGTGCAAATCTATTAGAGTGACCCTGGATCAACATATTTTCAGGGAAGAGCTGGAGCTCTGGCCATTGTTTGGAAAACATTTCACTGTGGAAGAACAAGACAAGATAGTAGGCCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTACCGTGGGTAACTTCTGCACTTACACAGGATGAACAGAACAAAATGATGGACACATGGAAACAGGCAACTAAAAATACCATGTTCAATGAATGGCTAAATGAATGCTTGAAAGAAAGTCCTGTATCTACATCACAGACAGAAGCATCAGAGCGTAGCACTTCACAAAGAGGTGGTGATTATCAAGAAAGCTTGAACATGAATGATCAGATGTTTAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAAATTCGTAAGGTTTATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCGTATCTTGTGCAGAATCTAATGACAAGTCGCTGGATAGCTGCACAACAGAAGTTACCTAAGGCTGCATCTGGGGAATCATCTAGTAAACAAATAGAAGGATGCTCACCATCATTTCGGGACCCAGAGAAACAAATATTTGGTTGTGAGCACTATAAGCGAAATTGCAAGCTTCGAGCTGCTTGTTGTGGGAAGTTATTTACTTGCAGATTTTGTCATGACAATGCGAGTGATCACTCAATGGATAGAAAAGCAACATTGGAAATGATGTGTATGCAGTGCCTGACTATACAGCCAGTTGGGCCTATATGCATGTCACCTGCTTGTAATGGACTTACGATGGCAAAGTACTATTGCAACATTTGCAAATTTTTCGATGATGAAAGGAATGTTTATCATTGCCCATTTTGCAATATATGCCGTGTTGGACAAGGGCTTGGGATTGATTATTTTCATTGTATGAAGTGCAATTGTTGCCTGGGGATAAAATCAACCTCTCATAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGCTGTGACGACTTGTTCACATCAAGTGCAACAGTGAGAGCTTTACCATGTGGGCATTACATGCACTCATCTTGCTTTCAGGCATACACTTGTAGCCACTACACATGTCCAATCTGCAGTAAATCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCTTTATTGGCTGCTGAGGAGCTTCCTGAAGAGTACAGGGACCGCCATCAGGATATACTCTGCCATGACTGTGATCGAAAGGGCACTTCACTCTTCCACTGGCTATATCACAAATGTGGATTTTGTGGCTCATACAATACCCGGGTGATCAAGAGTGAGACAACAAATTCTAGCTGCATTTAG 3798 0.4197 MATPLQHMDSGGGVAVLSNPVSKVDSSANGGGGFSRSLSESPILIFSFFHKAIRNELDALHRLAMAFATGNCSDIQPLFQRYHFLRSMYRHHSNAEDEVQVSEPLFPVLNFILNLVIFPALDIRVKNVAQTYSLEHQGESDLFDHLFELLNSSIHNDESFPKELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMTEFLPWLSTSISPDEPQDLRKCLSKIVPEEKLLQKVIFTWMEGRSSASTVENCVDQSQVRCSPNPLTQQNGKIKCACESTATGKRKYSGSSVDVSDTMRTHPIDEILLWHNAIKNELNEIAAQTRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGKFSFFQEHAEEESQFNDFRSLIESIQSEGATSSSETEFYSTLCSHADLILETIQRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLIGSLTEDEAQMFLKNMQLADDLCQFVPAPAIDSALVTLFSGWACKARKDGLCLSSSASGCCPAQRFTDIEENIVQSSCTSASVLSGRDCSVFSESDGTQQRSVKRNISEEHKNEDVSKTSERVSIQKQCCSARSCCVPALGVSRNNLGLGSHSTTKSLRSLSFTASAPSLNSSLFIWEIDNSSCDVGSIERPIDTIFKFHKAIRKDLEYLDVESGKLCDGDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDMSCVLSDLSVLHEDLQRTHMSADISESNFGISDANDSNNIKKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLKESPVSTSQTEASERSTSQRGGDYQESLNMNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKAASGESSSKQIEGCSPSFRDPEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNASDHSMDRKATLEMMCMQCLTIQPVGPICMSPACNGLTMAKYYCNICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRHQDILCHDCDRKGTSLFHWLYHKCGFCGSYNTRVIKSETTNSSCI 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3605g00001 1265 Pfam CHY zinc finger 1020 1095 IPR008913 GO:0008270
Mupr3605g00001 1265 Pfam Ring finger domain 1148 1190 IPR001841 -
Mupr3605g00001 1265 SUPERFAMILY CHY zinc finger-like 1012 1077 IPR037274 GO:0008270
Mupr3605g00001 1265 CDD RING-H2_Pirh2-like 1148 1191 - -
Mupr3605g00001 1265 Gene3D nmb1532 protein domain like 671 913 - -
Mupr3605g00001 1265 Gene3D nmb1532 protein domain like 318 466 - -
Mupr3605g00001 1265 Gene3D nmb1532 protein domain like 41 103 - -
Mupr3605g00001 1265 Gene3D nmb1532 protein domain like 114 208 - -
Mupr3605g00001 1265 Pfam Zinc-ribbon 1196 1253 IPR039512 -
Mupr3605g00001 1265 MobiDBLite consensus disorder prediction 906 928 - -
Mupr3605g00001 1265 SUPERFAMILY RING/U-box 1146 1201 - -
Mupr3605g00001 1265 FunFam Zinc finger protein-related isoform 1 1144 1193 - -
Mupr3605g00001 1265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1144 1193 IPR013083 -
Mupr3605g00001 1265 SUPERFAMILY Zinc hairpin stack 1086 1142 IPR037275 -
Mupr3605g00001 1265 CDD Hr-like 319 448 - -
Mupr3605g00001 1265 Gene3D - 1220 1262 - -
Mupr3605g00001 1265 ProSiteProfiles Zinc finger CTCHY-type profile. 1085 1148 IPR017921 -
Mupr3605g00001 1265 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 717 1261 - -
Mupr3605g00001 1265 SMART ring_2 1149 1190 IPR001841 -
Mupr3605g00001 1265 MobiDBLite consensus disorder prediction 578 597 - -
Mupr3605g00001 1265 CDD Hr-like 45 188 - -
Mupr3605g00001 1265 ProSiteProfiles Zinc finger CHY-type profile. 1013 1082 IPR008913 GO:0008270
Mupr3605g00001 1265 Pfam Hemerythrin HHE cation binding domain 316 450 IPR012312 -
Mupr3605g00001 1265 Pfam Hemerythrin HHE cation binding domain 50 190 IPR012312 -
Mupr3605g00001 1265 Pfam Hemerythrin HHE cation binding domain 674 837 IPR012312 -
Mupr3605g00001 1265 ProSiteProfiles Zinc finger RING-type profile. 1149 1191 IPR001841 -
Mupr3605g00001 1265 CDD Hr-like 676 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3605g00001 Mupr-Chr3605 5462 15446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3605g00001 1 1264 C2H2 Transcription Factor Family AT3G18290 65.447 0.0 1677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3605g00001 K16276 - gmx:100791354 2362.8