Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr35g00001 ATGCCTCTAAATTCACGTACACTCTTATTCTTATGCTTTTCTCTTTTATTCCCATACAATTCTTTCCTAGGTGTGGCAGTTAACGAACAAGGCCAAGCTCTCCTTTCATGGAAGAAAACCCTGAAGGGATCCCTCCAGGCGTTGAACAACTGGGACCCAATAGACCAAACACCATGCAAGTGGTTTGGAGTGAGCTGCAACGAGAACAACCAAGTGGTGGAGTTAGATCTGAGACGCGTGGTTTTGCTTGGAAAGCTTCCTTCTAATTTCACCTCATTATTCCCTTCCTTGAAGACGCTCACATTAACGGGAACCAACCTCACGGGTTCAATCCCAAAGGAAATAGCCACTCTCACCGAACTCACCTACTTGGACTTGAGTCACAATGCGTTGAGCGGTGAAATCCCAACCCAACTCTGCCACTTGAATAAGCTGAAGCAACTGCACCTTAACAATAACAACCTGGTACGGTCCATTCCGGTTGCAATCGGTAATCTCACTGAGTTAGAGTGGTTAATCTTGTTTGACAATCTACTAAGCGGTGAAATTCCCAGAACTATAGGGAACCTGAGGAATCTAAAAGTGATAAGAGCCGGTGGGAACAAAAACCTACGTGGACCTTTACCACAAGAAATCGGTAACTGCACCAATTTAGTGATACTAGGCCTCGCTGAAACAACAATTTCCGGTTCTCTACCTCCAACACTAGGCCTCTTAAAGAACCTACACACCATCGCACTCTACACTTCCCTTCTTTCTGGCCATATTCCCTTGGAACTCGGAAACTGCACCGAACTCCATAACATTTACCTCTACGAGAACTCCCTCACGGGTCCCATACCTATCACGTTGGGAAAGATTCGAAACCTGAAAACTCTCCTCTTGTGGCGCAACAACCTCGTTGGCACAATCCCAGCCGAGATAGGGAAGTGTAACGAACTAACCGTCGTTGACGTGTCAATGAATTCGCTAACGGGGAACATTCCAGAGAGTATGGGAAACTTGACGGCGTTAGAGGAACTGCAACTCGGCGTTAACAGGATTTCGGGGGAGATTCCATTCCAGCTAGGGAATTGTTGCAAACTCACTCACGTTGTGCTTGACAATAATGAAATAACGGGAACGATACCTTCAGAATTTGGAAACCTTAAGAATCTAACACTGTTATTCCTATGGCGCAATAGGATCCATGGTTCTATACCATCCGCGCTTTCGAAATGCGAAAACCTCGAAGCTTTGGATCTCTCGGTGAACAATTTCACGGGTCCTATACCCGAGGAAATATTCCAGCTCAGAAAACTGAATAAGCTTTTGCTTCTCTCCAACGCTCTCTCTGGAAAATTACCGTCCGAGATAGGTAATTGTTCTTCTCTGATTCGTTTCCGAGCTAGTAACAATGTCATCACCGGAAATATTCCTTGGCAGATTGGGAATCTTGAGAATTTGAATTTCTTGGATCTCGGAAACAACCGGATCATCGGAAATATTCCTGACGAGATCTCCGGCTGCCGGAATCTCACGTTTCTCGATCTGCATTCCAATTCCATCGCCGGAAACCTACCGGAGAGTCTCGGTGAACTTAACTCGCTTCAGTTTATTGACATCTCCGATAATAATATACAAGGCAAGCTTAGTCCCAGCCTAGGTTTGCTTAACTCTCTCAACAAATTCGTTTTACGGAAGAATCGTATTTCCGGGTCAATACCGAGTCAACTCGGTTCCTGCGCCAAGCTGCAGTTGCTGGACCTAAGCAACAACCGAATCTCCGGGAATATTCCCGGGAGTCTGGGGAATATTCCAGCGATGGAGATAGCTCTGAATCTGAGCTTGAACCAACTCTCCGGTAACATTCCTAAGGAGTTTTCGTCATTATCCAAACTCGCCGTTTTGGATATTTCTCACAATCATCTCAGCGGCGAGCTTCGGTATCTCGCCGGGCTGCAAAATCTCGTCGTGTTGAATATCTCGTACAATGAATTCTCGGGGCGCGTTCCAAACACCCCTTTCTTCGCGAAGCTTCCCCTCAGCGCGCTCGAGGGGAACCCGGCGCTGTGCCTGTCCGGCGGCGACGGAGGATCGAGGCGGCGAGAGAAGGCGGCGCGTGCGGCCTTCGCGGTCCTCCTCTGCTTCGCCGCGTGCGCGCTCCTCGTGGCGGCGCTGTGTGTCGTGGCAGCGGCGAAACGACATGAGGGGAGCGAAAACGACGTTGATGTTACCGACGCTGACGTGGACATGGCCTCGCCTTGGAAAGTGACGCTTTACCTGAAACTGGACCTGTCTATAGCTGACGTGGCAAAATGCTTGACAGCTGGCAATGTCGTTGGGCGTGGACGAACCGGCGTCGTATATCGAGTGGAAACGCCCGCGGGGTTGACCGTGGCGGTGAAGAGGTTTAAGTTGAGGGAGAAGTTCTCGGCGGCGGCGTTCGCGGCGGAGATTGCGACGTTGGCGCGAATCCGGCACCGGAACATCGTGCGGCTGTTGGGTTGGGCGGAGAACAGGAGAACGAAGCTGTTGTTTTATGATTATTTAGTAGGCGGGAATTTAGACGCGCTGTTGCACGAGGGGTGCGCAGGATTAGTGGAGTGGGAGACCCGGCTCAAGATAGCAGTGGGAGTGGCCGAGGGTCTGGCCTACTTGCACCACGATTGCGTCCCTGCTATCTTGCACCGGGACGTGAAGGCGCTCAACATTTTACTTGGAGACAGGTACGAACCGTGTCTGGCTGATTTTGGATTCGCTCGGCTAATGGAAGACGATCACGGTTCTTTTTCCGTCAACCCCCAATTCGCGGGTTCTTACGGTTACATTGCTCCTGAGTATGCGTGCATGCTTAAAATCACGGAGAAGAGCGACGTGTACAGTTATGGGGTGGTCCTACTGGAGATAATAACGGGGAAGAGGCCCGTGGATGCATCATTTCCGGATGGACAGCAACACGTTGTGCAATGGGTCCGAGAGCACCTGAGGAGGAAGAAGGACCCTGTTGAGGTTGTGGACCCCACGCTTCAAGGGCGTCCAGACGCACAGATACAAGAGATGCTTCAGGCACTCGGTGTCTGTCTCTTGTGCACCAATACTCGCGCTGAGGATCGACCCACCATGAACCACGTGGCTGCATTATTGAGGGAAATTCGACATGACCCTCCACCAGGTACTGAGCCCCACAAGACTACTACCACCTCCGCCAATGCTTCTTCTCTCACCCCTCCTCACTTGTTGCTTCTCCCATCCTCTTCCCCTTCCTCCTCACTCGCTTATTCTTCTTCCTCAGCTCTACCCTACCCTCTACAGGGTATCAACCACGAATCTTATTGA 3318 0.5042 MPLNSRTLLFLCFSLLFPYNSFLGVAVNEQGQALLSWKKTLKGSLQALNNWDPIDQTPCKWFGVSCNENNQVVELDLRRVVLLGKLPSNFTSLFPSLKTLTLTGTNLTGSIPKEIATLTELTYLDLSHNALSGEIPTQLCHLNKLKQLHLNNNNLVRSIPVAIGNLTELEWLILFDNLLSGEIPRTIGNLRNLKVIRAGGNKNLRGPLPQEIGNCTNLVILGLAETTISGSLPPTLGLLKNLHTIALYTSLLSGHIPLELGNCTELHNIYLYENSLTGPIPITLGKIRNLKTLLLWRNNLVGTIPAEIGKCNELTVVDVSMNSLTGNIPESMGNLTALEELQLGVNRISGEIPFQLGNCCKLTHVVLDNNEITGTIPSEFGNLKNLTLLFLWRNRIHGSIPSALSKCENLEALDLSVNNFTGPIPEEIFQLRKLNKLLLLSNALSGKLPSEIGNCSSLIRFRASNNVITGNIPWQIGNLENLNFLDLGNNRIIGNIPDEISGCRNLTFLDLHSNSIAGNLPESLGELNSLQFIDISDNNIQGKLSPSLGLLNSLNKFVLRKNRISGSIPSQLGSCAKLQLLDLSNNRISGNIPGSLGNIPAMEIALNLSLNQLSGNIPKEFSSLSKLAVLDISHNHLSGELRYLAGLQNLVVLNISYNEFSGRVPNTPFFAKLPLSALEGNPALCLSGGDGGSRRREKAARAAFAVLLCFAACALLVAALCVVAAAKRHEGSENDVDVTDADVDMASPWKVTLYLKLDLSIADVAKCLTAGNVVGRGRTGVVYRVETPAGLTVAVKRFKLREKFSAAAFAAEIATLARIRHRNIVRLLGWAENRRTKLLFYDYLVGGNLDALLHEGCAGLVEWETRLKIAVGVAEGLAYLHHDCVPAILHRDVKALNILLGDRYEPCLADFGFARLMEDDHGSFSVNPQFAGSYGYIAPEYACMLKITEKSDVYSYGVVLLEIITGKRPVDASFPDGQQHVVQWVREHLRRKKDPVEVVDPTLQGRPDAQIQEMLQALGVCLLCTNTRAEDRPTMNHVAALLREIRHDPPPGTEPHKTTTTSANASSLTPPHLLLLPSSSPSSSLAYSSSSALPYPLQGINHESY 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr35g00001 1105 SMART LRR_typ_2 335 359 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 624 647 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 142 166 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 479 503 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 383 407 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 551 575 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 287 311 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 408 431 IPR003591 -
Mupr35g00001 1105 SMART LRR_typ_2 118 141 IPR003591 -
Mupr35g00001 1105 SUPERFAMILY L domain-like 376 685 - -
Mupr35g00001 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Mupr35g00001 1105 Gene3D Ribonuclease Inhibitor 25 200 IPR032675 -
Mupr35g00001 1105 FunFam Predicted protein 184 282 - -
Mupr35g00001 1105 Pfam Leucine rich repeat 361 420 IPR001611 GO:0005515
Mupr35g00001 1105 Pfam Leucine rich repeat 95 155 IPR001611 GO:0005515
Mupr35g00001 1105 Gene3D Transferase(Phosphotransferase) domain 1 845 1060 - -
Mupr35g00001 1105 FunFam Nuclear pore complex protein NUP107 27 183 - -
Mupr35g00001 1105 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mupr35g00001 1105 Pfam Protein kinase domain 771 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr35g00001 1105 MobiDBLite consensus disorder prediction 1054 1091 - -
Mupr35g00001 1105 ProSiteProfiles Protein kinase domain profile. 768 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr35g00001 1105 SUPERFAMILY Protein kinase-like (PK-like) 758 1043 IPR011009 -
Mupr35g00001 1105 Gene3D Ribonuclease Inhibitor 431 688 IPR032675 -
Mupr35g00001 1105 Gene3D Ribonuclease Inhibitor 264 430 IPR032675 -
Mupr35g00001 1105 SUPERFAMILY RNI-like 74 442 - -
Mupr35g00001 1105 ProSitePatterns Protein kinases ATP-binding region signature. 774 796 IPR017441 GO:0005524
Mupr35g00001 1105 MobiDBLite consensus disorder prediction 1046 1091 - -
Mupr35g00001 1105 Gene3D Phosphorylase Kinase; domain 1 742 843 - -
Mupr35g00001 1105 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 844 1060 - -
Mupr35g00001 1105 Gene3D Ribonuclease Inhibitor 201 262 IPR032675 -
Mupr35g00001 1105 SMART LRR_sd22_2 118 144 - -
Mupr35g00001 1105 SMART LRR_sd22_2 575 594 - -
Mupr35g00001 1105 SMART LRR_sd22_2 479 498 - -
Mupr35g00001 1105 SMART LRR_sd22_2 624 649 - -
Mupr35g00001 1105 SMART LRR_sd22_2 383 412 - -
Mupr35g00001 1105 SMART LRR_sd22_2 503 529 - -
Mupr35g00001 1105 SMART serkin_6 768 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr35g00001 1105 FunFam Leucine-rich repeat receptor protein kinase EMS1 304 401 - -
Mupr35g00001 1105 PRINTS Leucine-rich repeat signature 624 637 - -
Mupr35g00001 1105 PRINTS Leucine-rich repeat signature 121 134 - -
Mupr35g00001 1105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 463 1043 - -
Mupr35g00001 1105 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 409 694 - -
Mupr35g00001 1105 ProSiteProfiles Leucine-rich repeat profile. 577 599 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr35g00001 Mupr-Chr35 10135 13757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr35g00001 26 1092 Receptor kinase-like Gene Family AT5G56040 53.056 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr35g00001 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr35g00001 - - gmx:100778064 1511.51