Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr359g00004 ATGGGAGATAACAATGTCAACCTCCCACCCGGGTTTCGCTTTTATCCCACGGATGAAGAGCTCGTTGTTCATTTCCTTCAAAGAAAGGCAAATCTTCTACCTTGCCATCCAGATGTCATCCCTGATCTTGAACTCTACCCATATGACCCTTGGGAACTTCATGGTAGAGCTTTGGCTGAGGGAAAGCAATGGTACTACTATAGCAGAAGGACACAAAATAGGGTCACTGCCAATGGTTATTGGATGCCAATGGGAATGGAGGAGGCAGTGGTTACAAGCTCAAGCAACAAGAGAGTTGGCATGAAGAAATATTATGTGTTCCATGTTGGAGAAGCCCCTAATGTTAACATAACCAATTGGATAATGCAAGAGTATCTTCTATTAGATTCTGCTTCCTCTAGCAGATCATCTAGAAGAAGAGCACAACCAAAACCGGACCATAGTAAATGGGTGATATGTCGAGTTTATGAGCGGGATAGCGATGAAGATGGTGGTGATGGAACAGAGCTCTCTTGTTTGGATGAAGTTTTCTTGTCATTGGATGATCTTGACGAAATAAGTTTGCCAAATTAG 573 0.4293 MGDNNVNLPPGFRFYPTDEELVVHFLQRKANLLPCHPDVIPDLELYPYDPWELHGRALAEGKQWYYYSRRTQNRVTANGYWMPMGMEEAVVTSSSNKRVGMKKYYVFHVGEAPNVNITNWIMQEYLLLDSASSSRSSRRRAQPKPDHSKWVICRVYERDSDEDGGDGTELSCLDEVFLSLDDLDEISLPN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr359g00004 190 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Mupr359g00004 190 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Mupr359g00004 190 FunFam NAC domain-containing protein 104 17 161 - -
Mupr359g00004 190 PANTHER NAC TRANSCRIPTION FACTOR 56 8 161 - -
Mupr359g00004 190 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Mupr359g00004 190 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr359g00004 Mupr-Chr359 27121 28022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr359g00004 6 160 NAC Transcription Factor Family AT1G52890 42.945 2.40e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr359g00004 NAM 8.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr359g00004 - - gmx:100788893 365.925