Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3589g00001 ATGCTTAAATTTTCTCTTCTATTTACGGTGTTATTTCTGCTATGGAAGCCTGCGATAAGCAAGAATGAGTGCACGGATAAGTGTGGACGCGTTCACATTCAATTTCCATTTTACCTGAGAAATAGCAAGTTGAATCACACCACCGGCTATCCTCCTGGGTTCGATCTGCTATGTACGGATGCAGATGAGACTGTGCTGGACCTTCCTTCTGTTCCAATAAAATTATTTGTCAGAAACATAGATTACAAGTCACAGCAAATCCAAATCTACGACCCTCAAAATTGCCTTCCCATGGTACTCATAAAACTCGGCAATTCATCTATTTCTCCATTTAAATTCAAATCATTTGGTGAGCGTAATGTTTCCTTCTTCCGCTGCAACAACTTAATGTCATGCCCAATTTTGCAACTTGGATCTGATGAAGATTTTATTGATCCTGAAATAATATCTTGCACCAAGGTCAGTGATGTTTTCTCCGTCCTGTGGCAAGTAGAGGATGACTTGAGGAACACTGTGGTTATGGAATGGTCCAACCCCGACTGTAGTTCCTGTGCAGCACAGGGGCATAAATGTAAATATAAGAATGGTACCAAAGGTGAAACTGAATGTTTCATTTGTCCAACAAACGCCATTCCAACATCAACTATTGTACTTATTGCTGCAGGGGGAATAGTTGGTTTGATTCTTTTCCTGCTACTGGTCAAGGCATTGTTTCATGTGTATGACTATAATAAGATGAAAGGAGAAGACCAGGGTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTACGAGATTCACTTATGCTGACATTAAGAGAATCACAAATGGGTTTAGTCAAAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAAGGAATGCTCTCCCATGAAATTCTCGTTGCTGTGAAGATACTCAATGACACAGTGGGAGATGGAAAGGATTTCATAAATGAAGTGGGAACCATGGGCAAAATTCATCACGTTAACGTTGTTCGCTTGCTTGGATTTTGTGCAGATGGATTCCACCGTGCTCTCGTCTATGATTTCTTCCCAAACGGGTCACTGCAGAGATTCTTGGCTCCACCGGACAACAAGGATGTTTTCCTAGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTTCCAGAGGGATTGAGTATCTCCACCTTGGCTGTGATCACAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTAATAGATGACCACTTCATTCCAAAAATCACTGATTTTGGACTTGCCAAGTTGTGTCCTAAAAATCAAAGTACAGTGTCTATGACTGCAGCCAGGGGAACCTTAGGCTACATTGCCCCTGAAGTTTTCTCAAGAAACTTTGGTAATGTGTCTTATAAGTCTGACATCTACAGTTATGGAATGTTGCTGTTGGAGATGGTTGGAGGAAGAAAGAATACAAATATGTCTGCAGAGGAAAGTTTCCAAGTTCTGTACCCTGAATGGATCCATAATTTGCTGGAAGGTAGAGACGTGCAAGTTATTATTGAGGATGAAGGAGATGTTAAAATTGCAAAGAAACTTGCCATTGTGGGACTTTGGTGCATTCAATGGAATCCAGTGGACCGTCCATCCATGAAAACTGTGGTACAAATGCTTGAAGGAGATGGAGACAAGTTAGTTGCACCTCCTACACCTTTTGACAAGACCGGTTCTTCTAGAACAAGTGCTGTTGTTCCAGCAAGACACCAGAATTTCGAGTTGGAAGTTATTCATGAAATAGAAGAGTAA 1779 0.4132 MLKFSLLFTVLFLLWKPAISKNECTDKCGRVHIQFPFYLRNSKLNHTTGYPPGFDLLCTDADETVLDLPSVPIKLFVRNIDYKSQQIQIYDPQNCLPMVLIKLGNSSISPFKFKSFGERNVSFFRCNNLMSCPILQLGSDEDFIDPEIISCTKVSDVFSVLWQVEDDLRNTVVMEWSNPDCSSCAAQGHKCKYKNGTKGETECFICPTNAIPTSTIVLIAAGGIVGLILFLLLVKALFHVYDYNKMKGEDQGRIEKFLEDYRAMKPTRFTYADIKRITNGFSQSLGEGAHGAVFKGMLSHEILVAVKILNDTVGDGKDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLAPPDNKDVFLGWEKLQQIALGVSRGIEYLHLGCDHRILHFDINPHNVLIDDHFIPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSAEESFQVLYPEWIHNLLEGRDVQVIIEDEGDVKIAKKLAIVGLWCIQWNPVDRPSMKTVVQMLEGDGDKLVAPPTPFDKTGSSRTSAVVPARHQNFELEVIHEIEE 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3589g00001 592 PANTHER RUST RESISTANCE KINASE LR10-RELATED 251 568 IPR045874 GO:0004672
Mupr3589g00001 592 Gene3D Transferase(Phosphotransferase) domain 1 354 556 - -
Mupr3589g00001 592 FunFam PR5-like receptor kinase 354 560 - -
Mupr3589g00001 592 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Mupr3589g00001 592 Pfam Protein kinase domain 283 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3589g00001 592 SUPERFAMILY Protein kinase-like (PK-like) 259 550 IPR011009 -
Mupr3589g00001 592 FunFam serine/threonine-protein kinase PBS1-like 247 353 - -
Mupr3589g00001 592 Pfam Wall-associated receptor kinase galacturonan-binding 24 91 IPR025287 GO:0030247
Mupr3589g00001 592 Gene3D Phosphorylase Kinase; domain 1 254 353 - -
Mupr3589g00001 592 ProSiteProfiles Protein kinase domain profile. 279 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3589g00001 Mupr-Chr3589 1239 3109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3589g00001 178 562 Receptor kinase-like Gene Family AT1G66910 41.707 1.40e-103 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr3589g00001 Pkinase 6.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3589g00001 - - gmx:100819302 1033.09