LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3588g00002	ATGGCTTCCCATGGCATCACCGACAATGACAAAAACACCTTGTTCCGAAAACTCAAGGCTAAGTCTGAAAACAAGATGTGTTTCGATTGCAATGCTAAGAACCCAACGTGGGCCTCCGTCACCTATGGAATTTTCCTCTGCATTGATTGCTCTGCTGTGCATCGTAGTCTCGGCGTACACGTTAGTTTTGTTAGATCTACGAATTTAGACTCATGGAGTCCAGAGCAATTAAGAACAATGAGTTTTGGAGGAAATAATCGTGCACGATATTTCTTTAAGCAACATGGTTGGACTGATGGTGGTAAAATAGAGGCGAAATATACATCAAAAGCTGCAGAGTTGTACAAACAAATTCTTTCTAAGGAAGTAGCTAAAAGTATGAATGGGGAAGCACTATTGCCTGTTGCTTCCCAGTCTGCACAAGTTACTGAAGGAATTTCTCAAATAAGGACCAATGAATTGCCAAAGGAAAATACTTTGCAAAATGCTGAAATGCCAGAGAGTACTTCTCCACCTAAAGCTTCACATACAACAGTTTCCACTGCTGTTAAGAAATCTACTACTGCTAAAAAATCTGGGAAGACCGGGGGACTTGGTGCCCGAAAGCTTACCACAAAGCCAAGTGAGTCTCTATATGAACAGAAACCAAAGGAACCACCAACTCCAATTACTTCCTCACCAAACAACAATTTACTTTTAGGGCCATCACTGACATCTCGATTTGAGTATATAGAAAATGTTCAATCATCTAATTTGAATTCTAAAGGCGGGAGTAAACACCTGGTTAGGCATGCATCCTTACCAGAGTCATCAAGCTTCTTTGCAGACTTTGGGACGGATAATGGTTTTGCAAATAATTTTGGGTCAAATTCCTCAAAAATGCAGGTCGAGGAGTCTAACGAAGCTAGGAGAAAGTTTTCAAATGCTAAATCTATTTCTTCATCCCAATTTTTTGGAGATTATAACAAAACTGCAAATGGTGCTCAATCTTCGACAGCCATCTCTAGTGCCGATCTTTTTGGTAACTCAACAAATAACTCGTCCATTGATCTAACTGCTAATGACCTCCTTAATCGATTATCTTTCCAGGCACATGAAGATATGTCTTCTCTTAAAAATATTGCTGGAGAAACTGGAAAGAAACTCAGCTCCTTGGCCTCCACTCTAATAACAGATATCCAAGAACGAATACTCTAA	1197	0.3993	MASHGITDNDKNTLFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWSPEQLRTMSFGGNNRARYFFKQHGWTDGGKIEAKYTSKAAELYKQILSKEVAKSMNGEALLPVASQSAQVTEGISQIRTNELPKENTLQNAEMPESTSPPKASHTTVSTAVKKSTTAKKSGKTGGLGARKLTTKPSESLYEQKPKEPPTPITSSPNNNLLLGPSLTSRFEYIENVQSSNLNSKGGSKHLVRHASLPESSSFFADFGTDNGFANNFGSNSSKMQVEESNEARRKFSNAKSISSSQFFGDYNKTANGAQSSTAISSADLFGNSTNNSSIDLTANDLLNRLSFQAHEDMSSLKNIAGETGKKLSSLASTLITDIQERIL	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr3588g00002	398	CDD	ArfGap_ArfGap2_3_like	10	125	-	-
	Mupr3588g00002	398	SUPERFAMILY	ArfGap/RecO-like zinc finger	13	125	IPR037278	-
	Mupr3588g00002	398	SMART	arf_gap_3	12	128	IPR001164	GO:0005096
	Mupr3588g00002	398	PRINTS	HIV Rev interacting protein signature	43	60	IPR001164	GO:0005096
	Mupr3588g00002	398	PRINTS	HIV Rev interacting protein signature	64	85	IPR001164	GO:0005096
	Mupr3588g00002	398	PRINTS	HIV Rev interacting protein signature	24	43	IPR001164	GO:0005096
	Mupr3588g00002	398	Pfam	Putative GTPase activating protein for Arf	14	112	IPR001164	GO:0005096
	Mupr3588g00002	398	MobiDBLite	consensus disorder prediction	147	193	-	-
	Mupr3588g00002	398	MobiDBLite	consensus disorder prediction	147	230	-	-
	Mupr3588g00002	398	FunFam	ADP-ribosylation factor GTPase-activating protein AGD10	1	140	-	-
	Mupr3588g00002	398	PANTHER	ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED	7	398	-	-
	Mupr3588g00002	398	Gene3D	Arf GTPase activating protein	3	141	IPR038508	-
	Mupr3588g00002	398	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	12	117	IPR001164	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3588g00002	Mupr-Chr3588	9408	14286	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3588g00002	15	93	C2H2 Transcription Factor Family	AT4G21160	45.000	1.42e-19	87.4