Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3586g00003 ATGATGATCCCAAATGTTGAAATTCCCCGTTGGGACGCCGATGGAGGAGCACTCTCCCCATTCTCTTCCAATGCAGAAGACACGTGCTCTTTCTCCACCGACGATTTCCGAATGTTCCAATTCAAGGTTAGGAAGTGTCCACGTGGCAGGTTCCACGAGTGGACGGAGTGTCCGTACGCCCACCCTTCGGAGAAAGCTCGTCGGCGAGACCCTCGCAAGTACCTCTACTCGGCCACGGCGTGCCCCGATTACCGCAAGGGGAACTGCAAGAGGGGTGACACGTGTCAGTTCGCTCACGGCGTGTTTGAGTGCTGGCTCCATCCTTCTCGCTACAGGACACAGCTCTGCAAGGATGGAACCGCTTGCCGTCGCCGAGTGTGCTTCTTCGCTCACACCACCCACCAGCTCCGCCTCGTCGCCAACGCTGTTTCTTCCCCCACTTCGGTTATTAACTCTTCCTTCTCCGATTCGCCACCCTCTTCGCCGTACGTGCGAGAAATAGTCAACTCAATGCGGAAGGTCCAACTCGAGGAGGGACCATCTTCGGGTTTAACCCGTTGCTTGTTCGGCTTGCCACGTGGCGGGTTTTTAAGTCCTAATGGGTTCGAGGAAGAGCCTGCTATGGAGAGGGTGGAATCGGGAAAAGACATTAGAGCGAGAATCTACGCCAAGCTTAGTAGGGACAACTCCATCCGAGCCTGA 702 0.5584 MMIPNVEIPRWDADGGALSPFSSNAEDTCSFSTDDFRMFQFKVRKCPRGRFHEWTECPYAHPSEKARRRDPRKYLYSATACPDYRKGNCKRGDTCQFAHGVFECWLHPSRYRTQLCKDGTACRRRVCFFAHTTHQLRLVANAVSSPTSVINSSFSDSPPSSPYVREIVNSMRKVQLEEGPSSGLTRCLFGLPRGGFLSPNGFEEEPAMERVESGKDIRARIYAKLSRDNSIRA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3586g00003 233 SMART c3hfinal6 110 133 IPR000571 GO:0046872
Mupr3586g00003 233 SMART c3hfinal6 75 101 IPR000571 GO:0046872
Mupr3586g00003 233 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 79 100 IPR000571 GO:0046872
Mupr3586g00003 233 ProSiteProfiles Zinc finger C3H1-type profile. 75 102 IPR000571 GO:0046872
Mupr3586g00003 233 SUPERFAMILY CCCH zinc finger 74 104 IPR036855 GO:0046872
Mupr3586g00003 233 Gene3D - 38 100 - -
Mupr3586g00003 233 PANTHER UNKEMPT FAMILY MEMBER 29 231 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3586g00003 Mupr-Chr3586 29291 29992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3586g00003 31 137 C2H2 Transcription Factor Family AT5G12850 66.355 2.79e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr3586g00003 zf-CCCH 7.2e-08 CL0537