Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3566g00001 ATGGCTGAGACCAGAAAGTACATTCGGAACCCACAATTAGGTTTGCTTCCCCATTTTCGTGCTGGAAAGCTTCACTTGGATTGGATCACTGATCACAATTGTTGGTTAGGCTTGGAAAAGCTTGAAGAGATACTGCAAGAAGCAGAGCATCGATGGCTTCGACCTGCTGAAATATGTGAGATACTTCGCAATTTTACAAAGTTTAAGTTAACACCAGATCCACCTATTAGGCCTCCAGCTGGATCACTATTCTTATTTGATCGTAAAGCCCTTCGTTACTTTCGCAAGGATGGTCACCGGTGGAGGAAGAAGAAAGATGGCAAGACTGTAAGAGAAGCTCATGAAAAGTTGAAGGCTGGTAGTGTGGATGCATTGCATTGTTACTATGCTCATGGTGAGGATAATGAAAATTTCCAACGGAGAAGTTATTGGATGCTTGACGAGCAGTTAGAACACATTGTCCTTGTGCATTATCGAGAAATTAAAGAGGGCTGCAAGTCTGGCATCTCACATTTGCCTTTAGTTCCAGTAACCCTGGTTGGTAGTTCTCAAAATAGTTCAGTGCCTTCCTCTACCAAAATAAACTCACCAATATCTGTAGTTCAAACATCTTTTACATCAAGTGCAAATAAAGTTGATCAGAATGGGCGAGCTTCAGAGTATGAGGATGTCAATTCACAGAATGGTCCTCGAGCCTCCTCTCATGCTCAGCCTATCAGCAATTCTATACTTCACAGTGCACCTCAGCTTACACATGAAAATACTGGGTTTTCTGAGTTTTTAAGGAATCCCTCGATTTCATCATGGTCATCTTCTTTCCCTGGCTATTCTCCTGGTACTGGCTTGTCTCCCTGGACCTTAATTCAGAACTCTAGCAGAAATACAATTAATATGCGTGATGGAAAACATCATGTTGAAGGCTCTGAAGCTGACTTCACTGTTCATAAGCTAAGCAATGCTGGGTTAGATGCTGTTCGCAGAATGCAAGATGGTGTAGTTTTAAGAGATAGGCTCATCACTGACATGTGCATCCAGCCAGCTGAAGAAGATTTGTCAACTGTTAATCAGGTGCAAAACGAGCATGATCTAGATTCATTTCGTGCTCAATTCCATGATCATAATGATCATCCCATTGTTGCAACTCCTAAAATCCTAGTTGAACAAAACCTTCAGAATGGTGGTTTAGACAATCATAAATCAGAACAAATTGAGTCTGGGGAAATGAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAGATTGGTGGAGACTGTGATAATTCCTTGATGGCTTCAGATTCTGGTAATTATTGGAGTACACTTGATGATCATAACGAGGATAAGGAGGTATCTAGTTTACGCCACATGCAGTTGGATATGGATTCATTGGGCCCTTCTCTTTCCCAAGAACAACTATTTAGTATCCATGACTTCTCTCCAGATTGGGCATATACTGGGGTTAGAACAAAGGTTTTAATAGTTGGCACATTTCTGGGGAGTAAAAAGCTCTCTAGTGAGACCAAATGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGGCAGATAATGTCATACGCTGTCAGACTCCTTTGCATTCACCTGGTCGTGTACCATTCTATGTTACCTGCAGTAATAGGTTAGCCTGCAGTGAGGTCAGGGAATTTGAATTTGCCGAAAATCCAACCAAATTTTTAGGTCCTGTGGGTATTAAAATCTCACCAGAAGATGAGGTACGACTTCAAATGCGACTTCTTAAACTACTAGACTTGGGACCTGACAATAAGTGGTTGAAGTGCTCTGTTTCTGAATGTGACAAATGTAAACTCAAGGGAACAATGTATTCCATGAGAGATGATAGTGGAGTATTTGAAGATACTTTCCAGATTGATGGAATTGGTCTTATAAACCATAGAGATGTGTTATTTCAGAGATTAATGAGAGACAAGCTTTATGAGTGGTTGATATATAAGGTTCATGAAGGAGGAAAAGGACCACATGTTTTGGATGATGAAGGCCAAGGAGTAATACATTTGACAGCTGCACTTGGTTATATGTGGGCTATGGCCCCATTAGTTGCTGCTGGTATCAGTCCTAACTTCAGAGATACTCATGGAAGAACAGGACTTCACTGGGCATCATATTTTGGGAGAGAAGAAACTGTTATTGTGCTAGTCAAATTAGGTGCAACCCCAGGTGCTGTTGAGGATCCAACATCAGCATTTCCTCGAGGACAAACAGCAGCTGATATAGCTTCAAGTAGAGGACATAAAGGCATTGCTGGGTTTTTGGCCGAGGCGGATCTGATTTATCAATTATCTGTATTGACTGTCAAGGAAAATGATACTGACAACAATGCTACAACCATGGCAGCTGACAGTGCTTTTCAGTCTGCTGAAGATGACTCATCCAATATGACAATGGATGAGCAACATTATCTCAAAGAGTCACTTACTGTGTTTCGAAAATCAGCTCATGCAGCCGCTTCAATCCTAGCAGCCTTTAGAGCAAGGTCATTCCGTCAGAGACAACTAGCCAAAAACAGCAGTGATATTTCTGAAGCAGTATTTGACGCAGTTGCTGATTCCTTGGGCAAGCTACAGAAGATGGGTCACTTTGAGGATTATTTACATTTTGCAGCTTTAAGGATTCAAAAGAGATATCGTGGATGGAAAGGAAGAAAAGATTTTTTGAAGATACGCGACCGCATTGTAAAAATTCAGGCTCATGTTAGAGGACACCAAGTTCGTAAGCAGTACAAAAAAGTTGTGTGGTCTGTTAGCATTGTGGAAAAGGTGATTCTGCGCTGGAGACGGAAAGGCACTGGTCTGCGAGGATTCCGGCTTGGGCAGCCAGTTGGCATTGTGGCTAAAGATGCTGACAAAAGTGACGAGTATGAATTTCTTAGCATTGGGAGGAAACAGAAATCAGATGGTGTAAAGAAAGCTCTCGATAGAGTCAAGTCCATGGTTCATAACCCGGAGGCAAGGGATCAGTATATGAGGCTCATCATGAAATACCAGAAGTTTAAGGTATGGAGTTAG 3054 0.4165 MAETRKYIRNPQLGLLPHFRAGKLHLDWITDHNCWLGLEKLEEILQEAEHRWLRPAEICEILRNFTKFKLTPDPPIRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDALHCYYAHGEDNENFQRRSYWMLDEQLEHIVLVHYREIKEGCKSGISHLPLVPVTLVGSSQNSSVPSSTKINSPISVVQTSFTSSANKVDQNGRASEYEDVNSQNGPRASSHAQPISNSILHSAPQLTHENTGFSEFLRNPSISSWSSSFPGYSPGTGLSPWTLIQNSSRNTINMRDGKHHVEGSEADFTVHKLSNAGLDAVRRMQDGVVLRDRLITDMCIQPAEEDLSTVNQVQNEHDLDSFRAQFHDHNDHPIVATPKILVEQNLQNGGLDNHKSEQIESGEMKKLDSFGRWMDKEIGGDCDNSLMASDSGNYWSTLDDHNEDKEVSSLRHMQLDMDSLGPSLSQEQLFSIHDFSPDWAYTGVRTKVLIVGTFLGSKKLSSETKWGCMFGEIEVSAEVLADNVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFEFAENPTKFLGPVGIKISPEDEVRLQMRLLKLLDLGPDNKWLKCSVSECDKCKLKGTMYSMRDDSGVFEDTFQIDGIGLINHRDVLFQRLMRDKLYEWLIYKVHEGGKGPHVLDDEGQGVIHLTAALGYMWAMAPLVAAGISPNFRDTHGRTGLHWASYFGREETVIVLVKLGATPGAVEDPTSAFPRGQTAADIASSRGHKGIAGFLAEADLIYQLSVLTVKENDTDNNATTMAADSAFQSAEDDSSNMTMDEQHYLKESLTVFRKSAHAAASILAAFRARSFRQRQLAKNSSDISEAVFDAVADSLGKLQKMGHFEDYLHFAALRIQKRYRGWKGRKDFLKIRDRIVKIQAHVRGHQVRKQYKKVVWSVSIVEKVILRWRRKGTGLRGFRLGQPVGIVAKDADKSDEYEFLSIGRKQKSDGVKKALDRVKSMVHNPEARDQYMRLIMKYQKFKVWS 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3566g00001 1017 Gene3D Immunoglobulins 469 567 IPR013783 -
Mupr3566g00001 1017 FunFam Calmodulin-binding transcription activator 2 879 927 - -
Mupr3566g00001 1017 ProSiteProfiles Ankyrin repeat region circular profile. 708 733 - -
Mupr3566g00001 1017 SUPERFAMILY E set domains 476 561 IPR014756 -
Mupr3566g00001 1017 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 41 1011 - -
Mupr3566g00001 1017 Gene3D - 651 881 IPR036770 -
Mupr3566g00001 1017 MobiDBLite consensus disorder prediction 209 237 - -
Mupr3566g00001 1017 ProSiteProfiles IQ motif profile. 903 931 IPR000048 GO:0005515
Mupr3566g00001 1017 Pfam IQ calmodulin-binding motif 883 900 IPR000048 GO:0005515
Mupr3566g00001 1017 Pfam IQ calmodulin-binding motif 905 924 IPR000048 GO:0005515
Mupr3566g00001 1017 FunFam Calmodulin-binding transcription activator 2 469 566 - -
Mupr3566g00001 1017 ProSiteProfiles IQ motif profile. 880 909 IPR000048 GO:0005515
Mupr3566g00001 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 875 930 IPR027417 -
Mupr3566g00001 1017 Gene3D - 882 927 - -
Mupr3566g00001 1017 ProSiteProfiles Ankyrin repeat profile. 708 740 IPR002110 GO:0005515
Mupr3566g00001 1017 CDD IPT 475 561 - -
Mupr3566g00001 1017 SMART iq_5 879 901 IPR000048 GO:0005515
Mupr3566g00001 1017 SMART iq_5 902 924 IPR000048 GO:0005515
Mupr3566g00001 1017 Pfam IPT/TIG domain 476 553 IPR002909 -
Mupr3566g00001 1017 SUPERFAMILY Ankyrin repeat 661 770 IPR036770 -
Mupr3566g00001 1017 SMART CG_1_2 44 162 IPR005559 GO:0003677
Mupr3566g00001 1017 Pfam CG-1 domain 47 160 IPR005559 GO:0003677
Mupr3566g00001 1017 ProSiteProfiles CG-1 DNA-binding domain profile. 41 167 IPR005559 GO:0003677
Mupr3566g00001 1017 SMART ANK_2a 747 778 IPR002110 GO:0005515
Mupr3566g00001 1017 SMART ANK_2a 708 737 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3566g00001 Mupr-Chr3566 15182 24729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3566g00001 41 1014 CAMTA Transcription Factor Family AT5G64220 41.797 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mupr3566g00001 CG-1 7.3e-49 No_clan