Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3555g00006 ATGGTGTACGATCATATGATAAAGAAAAATGATATGGAAGATTCAGAGGAGGATGAGCTTTTGAATCTTAGCCTATCAGTTGCTGCCGATAGGGAAAGGAAAAAGAAGGGAAAGATAATTAGGGAACACAACGTTTCTATGAGTAGTAGTACTACTAGGACGAACTCCTACGAAAGCTACGAAGGGAAGATCTTTAGGCTTCTCCAAATGAGGGAGCAGATGCTAAGACAAGACCATAGGAGGAAAGGAGTTGTAGAAGATGGGAATGGGCTTCCTTTGATCCATTTGCTTCTCTCAACTGCCACTGCAGTTGATGACAACAACTTGGATTCATCCTTAGAGAATATCACTGATTTATACCAAACTGTTTCCCTAACAGGTGATTCGGTTCAACGTGTGGTGGCTTATTTCGCTGATGGTTTGGCTGCTAGGATTCTCACAAGGAAGTCCCCATTCTATGAGATGCTGATGGAGGAACCAACAACTGAGGAAGAGTTCCTTGCGTTCACAGATCTCTACAGGGTTTCACCTTACTACCAATTTGCTCATTTCACGGCAAACCAAGCCATCTTAGAGGCTTTTGAGAAAGAGGAAGAGAGGAACAACCGTGCTTTGCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCCTCTCTCATTCAGTCTCTTTCGGAGAAGGCAACCACTGGCAACCGCATATCCCTCAGGATAACTGGATTTGGGAAGAACCTGAAAGAGCTTCAAGAAACTGAGTCTAGGTTGGTTAGTTTCTCAAAGGGTTTTGGCAGCCTTGTGTTTGAGTTCCAAGGGCTGCTAAGAGGCTCAAGGGTGATCAACCTGAGGAAGAAAAAGAATGAAACTGTGGCTGTCAACTTGGTTTCTTATTTGAACACTTTGAGTTGTTTCATGAAGATCTCTGACACATTGGGATTTGTTCATTCCCTTAACCCCTCCATTGTTGTGCTGGTGGAGCAAGAAGGTAGCAGGAGTCCTAGGAGCTTCTTGTCAAGGTTCACAGACTCTTTGCACTACTTTGCAGCCATGTTTGATTCCCTTGATGATTGCCTCCCTCTTGAGAGTGCTGAGAGGTTGAGAATTGAGAAGAAACTCTTGGGGAAAGAGATCAAAAGCATGCTCAACAATGATGTGGATGGTGTGGATTGCCCCAAGTATGAGAGGATGGAAACATGGAAAGCAAGAATGGAGAATCATGGCTTTGTTGCCACCAAAATAAGCTCAAAGTCTATGATCCAAGCAAAACTGCTCCTGAAGATGAGGACCCATTATTGTCCTCTCCAGTTTGAGGAAGAGGGAGGTGGGGGTTTCAGGGTTTCTGAAAGAGATGAAGGAAGGGCTATCTCTTTAGGGTGGCAAAATAGGTTTCTGCTTACCGTCTCGCCATGGCAATCAGTCTGA 1422 0.4444 MVYDHMIKKNDMEDSEEDELLNLSLSVAADRERKKKGKIIREHNVSMSSSTTRTNSYESYEGKIFRLLQMREQMLRQDHRRKGVVEDGNGLPLIHLLLSTATAVDDNNLDSSLENITDLYQTVSLTGDSVQRVVAYFADGLAARILTRKSPFYEMLMEEPTTEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFEKEEERNNRALHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITGFGKNLKELQETESRLVSFSKGFGSLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSCFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRSFLSRFTDSLHYFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGVDCPKYERMETWKARMENHGFVATKISSKSMIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDEGRAISLGWQNRFLLTVSPWQSV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3555g00006 473 ProSiteProfiles GRAS family profile. 84 471 IPR005202 -
Mupr3555g00006 473 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 72 466 IPR005202 -
Mupr3555g00006 473 Pfam GRAS domain family 93 471 IPR005202 -
Mupr3555g00006 473 Coils Coil 363 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3555g00006 Mupr-Chr3555 43103 45893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3555g00006 89 471 GRAS Transcription Factor Family AT1G14920 34.085 1.40e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr3555g00006 GRAS 8.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3555g00006 - - gmx:100809458 833.172