LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3548g00006	ATGGCGGAGGACCGTAGTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACCGAAGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGTGACACTTTCAAGAATGGGTGCTATGTTGTGCAGAGCAAGCTTGGTTGGGGTCACTTTTCCACTGTTTGGCTCGCTTGGGACATTCACAAATCGCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGATGGGGATCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGGCCCAATGGCCAGCATGTTTGTATGGTTTTTGAGTTCCTTGGTGATAATCTTCTCACTCTTATCAAGTATAGTGACTATCGAGGGGTTTCCCTTCCCATGGTCAAGGAAATCTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAACTTTCCGTAATACACACTGATTTGAAGCCTGAGAATGTCCTGCTTCTGTCTCCAATTGATCCATCTAAGGATCCTAGAAAATCAGGCATTCCACTTATCCTTTCAAACACCAAGGATAAGACTGTGACCAAGAATGGGACTTCGAAAGACAATAAAAGTTTGAATGGAGATCTGACTAAGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCAGCTCAAGGTTGTGCTGGGAGGGAAAATCCTGAGGAAGCTGAGGAGGATTCCAAAGCACCCGATGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAATCTGGTGAAGTTAACCCTAATAGTCCTGTGAGTAAAGACGAATCAACAAAGACTCTTGAAAATAAGGATGTTCCACAAGGAAGTCATGGTCAAAGGAGAGGTAGCCGCTCTACAAGAAAGAAGTTGCTTGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACCTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATACTCAACTCCAGTAGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGTGATGTTCTTTTTGATCCTCATAGTGGTGAGAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGCGGCCGCTATTCCCGAGATTTTTTCAATAGATATGGTGATTTGAGGCACATTCGTCGGTTGCGTTTCTGGCCTCTTACAAAGGTGATGATGGAGAAGTATGGTTTCAGTGAACAAGATGCAAATAATATGGCTGACTTCCTTCTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACTGCTGCACAATGCCTTCAGCATCCATGGTTCAGTGCAGGTCCCCGAACTCTTGAGCCCTCATCCACTACGGTGCAGCATGATGGCGAAATATCTGAAAAGATGCAAAGGGAAAAGGCTGAGCAGGAGGCTGTGGAAGTTGGTATGGGGAATATGGCCATAGATGGAAATCAAAGCCACTCTTAA	1599	0.4371	MAEDRSEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDIHKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVSLPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRKSGIPLILSNTKDKTVTKNGTSKDNKSLNGDLTKNQKKKLRKKAKKAAQGCAGRENPEEAEEDSKAPDEQDDCSNDVKPSVESGEVNPNSPVSKDESTKTLENKDVPQGSHGQRRGSRSTRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPVDLWSFACICFELATGDVLFDPHSGENYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLTKVMMEKYGFSEQDANNMADFLLPLLDFVPEKRPTAAQCLQHPWFSAGPRTLEPSSTTVQHDGEISEKMQREKAEQEAVEVGMGNMAIDGNQSHS	532

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr3548g00006	532	Pfam	Protein kinase domain	319	482	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3548g00006	532	Pfam	Protein kinase domain	40	179	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3548g00006	532	Gene3D	Transferase(Phosphotransferase) domain 1	123	483	-	-
	Mupr3548g00006	532	FunFam	CMGC/SRPK protein kinase	26	125	-	-
	Mupr3548g00006	532	FunFam	Serine/threonine-protein kinase SRPK-like protein	312	482	-	-
	Mupr3548g00006	532	SMART	serkin_6	40	482	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3548g00006	532	PANTHER	PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED	10	503	-	-
	Mupr3548g00006	532	MobiDBLite	consensus disorder prediction	270	286	-	-
	Mupr3548g00006	532	MobiDBLite	consensus disorder prediction	198	219	-	-
	Mupr3548g00006	532	CDD	STKc_SRPK	29	482	-	-
	Mupr3548g00006	532	MobiDBLite	consensus disorder prediction	190	310	-	-
	Mupr3548g00006	532	ProSiteProfiles	Protein kinase domain profile.	40	482	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr3548g00006	532	SUPERFAMILY	Protein kinase-like (PK-like)	35	491	IPR011009	-
	Mupr3548g00006	532	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	167	179	IPR008271	GO:0004672\|GO:0006468
	Mupr3548g00006	532	ProSitePatterns	Protein kinases ATP-binding region signature.	46	69	IPR017441	GO:0005524
	Mupr3548g00006	532	Gene3D	Phosphorylase Kinase; domain 1	16	122	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3548g00006	Mupr-Chr3548	38533	43191	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3548g00006	6	529	EF-hand Containing Proteins	AT5G22840	69.606	0.0	733

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_SRPK	Mupr3548g00006		Pkinase	2.2e-21	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr3548g00006	K08832		-	gmx:100791829	1000.35