Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3545g00011 ATGATGGAAACGAGTTATTCTCCGCGTGGGTTTCGCGGTGTTCGTTTCGTTCTCTGTGGCTTTCATCCCGTCGCCGAAAGCCAGATCCGGTTCAAGCTCGTGAGTGGCGGTGGAGTCGACGTAGGACAGTACGGTGGGAGTTGCACGCATGTCATCGTCGATAAGATTGTTTATGATGATCCTGTGTGTGTTGCTGCAAGAAATGATAGGAAGACGCTCGTCACTGCATTGTGGGTTGAACACAGTGCTGATATTGGAATGCCCGTTGATGCTGCTTCGGTTATGTACAGACCTCTTAAAGACTTAGATGGAATACCGGGTGCAAAAGATTTGATAATGTGCCTGACTGGTTATCTACGTCAGGATCGGGATGATATTATGACGATGGTTGGCCTGATGGGTGCACAGTTTTCTAAGCCATTGGTGGCAAACAAGGTTACTCATCTCATATGCTACAAATTTGAAGGGGAGAAGTATGAGCTTGCCAAGAAATTGGGCACAATAAAGCTAGTTAATCATCGTTGGTTGGAAGATTGCTTGAAGGAATGGGTGCTTCTTCATGAAGACAAATATAACAAAAGCTCTTATCTGTTTCAATTAATTGCCGAAACTTTGTTCCTTTTCAATAGTGGTTTTGAACTCGAGATGATGGAGGAAGAGGCTAAGGATTCTGAGGAAGAGGCTGAAGATTCTAAGCTGGGACAATCAGGGGGAAGAAAAAGAAAACAAAGCCCCCTTAGCTCTAAATTTGGTATAGCTGCTACTCATGGATTGTCGAAATCAGTAAGAGAGCCATCGAACGCCTTACCAGATTCTACTGTTCCACAGGTTTTGCCAAATGTCAATAATGGTGAAAACTCTTCAGTCATTCCAGGAAATGAGAACAAATCTGATAAAGACTTGAGCATTCATAATGTTGATGACTCAAAGATAAGCTATCAGGCTCCTGACGTTTCTAGACATTCTACATCATGTCAGTTACCTGACAAATATGTAAAGACCAGTGAGTCTAAGAATGCTGATATTCCAAAGGCACCAGGACGCCAGGATCTTGGCAATATGGGAAATACTAATTCATCTGGTCAGCAACCTGATCTGCATTATGACACCTCGGAGTCTAAGAAGTTGGTAAGTGACTTGAGATCAACTTCTGCAAGTGCTGCTGGAGTTGCACATTCAAATGAACAGCTTAGAACTATGAGTCATTCTAGGAAGAACCAAAGGGGGTTTCCTCTTCCAAGGATCTTAGATAAAAGCTCATGCAGAGAAGGCAACAACTGTGAAAATAGTAAGGTTGAAAAGGCAAGTGAGGGTATCAAATCTGCCAGTGCAGAAGCTTCTGGAAAAGGAAATGATATTATTAAAGAAGACGAGCCAATTAGTATATTATTGCCTCAAAAGAGGATAAATGAAGCCTCTTTTACTAAATTAAAATCAAGAAAGATGACTGCTGATGCAAAATTCTCCAACCCATCGCCAAATGATAAATCTCAAGGGTTAAAAGTGACATCTCAGGTTGATGAGCTACCTGAAGCTGGCGACTATTTTTCCTTAGGCAAAGATGGTATAAATTACTCAAACACTTGCTTAGTTTCAAAACCTGCAGGTTCTACCTCCAACTCACTGGCATTTGATGAGCCTTTCTCAAGAAACGCAAGCCCAGAATCTGGTCAGTGTGATAATGTCTATCAGAATTCACCACAAACGGCTGTTCAGTGGTTAAGTGAGTCTAAAATTAATGGCAAGCCTGATATCACAGGTTCTGGAATGCGACAAGTTGATGGTAATGAAGCAGAGCAACATAATGTCACTAAAAGTCTTGATTGTTCATCACTGGGAAACAAAAAGTCACATAATGTGGAATCCACTGGTTGTAGTAATTTGGATTTAAGCAATGAAGAAAGTGATAAACTGATTAGAAAATCACCCCGAAAGAAGTCGACTTCCAAGAAAAATTTCGATTCTAAACCGAAAGTAGGTGCCACGGCTAGACAGAAAAGTTCACTTACCTTGAATAAAACTACCCTGCAAGGTGATGGTTTAACTTTTTCCAGCGGAAGCAAAGAGATTGCAACTTGTGATGCAAAGATGCATCAGGGATGTCTCCAAATCCTTGATGTTAATAAAACAATGGAGCAAGAAACCGTTAGTAAATATGCAGAAGATGCTGGTGGCAGAACTGAGTTTTTGGATGATGAAACCGAGGCTCCAGATGACAAATGTGAATATGAGTTAGGAATGGCAATTGATGAAGAATCCGTTCATCTTTCAAAAAAGTCAGATACAGCAACAGAAGAGAAGTCAGAAGCAATTTGCCCTGCAACAAAATGTGAAGAGACAATGCCTCCTAAGAAAGGCACAAACAAAACTGAAAAACAGAAGCCATCTTCACTGGTGGTAAAGCATCGAGCAAGAAAACGTCCTGCTGGTAAAGCCAAGGCCACAGTTAGTAAATATGCAGAAAATGCTGGTGACAGAACTGAGTTTTTGGATGATACAACTGATGCTCCAGATGACAAATGTGAATACGATTTAGGAATGGCACTTGATGAAGAATCGGTTCATCTTTCAAAAAAGCCAGATACAGCAACAGAAGAGAAGTCCGAACCAATTTGCCCAGCAACAAAATGTGAAGAGGCAATGCCTCCTAAGAAAGGCACCAGTAAAACTGAAAAACAGAAGCCGTCTTCACAAGTGGTAAAGCATCAAGCAAGAAAACGTCCTGCTGGTAAAGCGAAGGCCACAGTTGCAAGGGAATTATCGAAATCTAAAGTGGCAGTATCTGGGGAGAAGATTCCTAATGAGATGGGGCATGAGCCAGAGATAGAAACAGTGCAAGAAATGTCCCGTCCTGCTGATAAAAGTGACAACTTAACCGTACCAAGAAATAAGTTGGAGAAATTAGCTGAAGAAGAGAAGGAGAATAGACCAATTGATGTAGGGCTAGCAAAGATCAAGTCTAGGAAATTGGGGCACAATCCATCTATATCAGGATCTTATACAAGGGTAAAAACTGAAGCCGTATGTTTTATATTAAGTGGCCATCGTCTACAGAGAAAAGAGTTTCAACAAGTAATCAAGCGTTTAAAAGGAAGGGTTTGCAGGGATTCTCATCAGTGGTCATATCAGGCGACACACTTCATAGCTCCAGACCCCATACGCAGGACAGAGAAATTTTTTGCTGCTGCTGCATCAGGAAGGTGGATTCTTCAAACTGATTTCTTAACTGCCAGTAGCCAGGCAGGAAAATTCTTGCCAGAGGAGCCTTATGAGTGGCACAAGAATGGTCTCAGTGAGGATGGCACAATCAATATGGAGGCTCCGAGGAAGTGGCGGATGTTGAAAGAAAGAACAGGTCACGGCGCCTTCTATGGAATGCGTATTGTTGTATACGGCGATTGCATTGCCCCGCCTTTGGATACTCTGAAGCGTGTCATTAAAGCTGGAGATGGAACAATATTAGCAACTTCTCCTCCTTATACTCGCTTCCTTGGTACCGGAATCGACTATGCTGTAGTTAGCCCTGGCATGCCACGTGTTGATTTGTGGGTCCAAGAGTTCTTAAAACATGAGATACCTTGTGTTGTAGCGGACTACTTGGTTGAGTATGTTTGCAAGCCCGGGTTCTCCCTTGAGAGACATGTATTATATGGTACTCATGCTTTGGCAGAGAGATCATTTGATAAACTTAAAAGTAGGGCAGAAGAGATTGTTGAAGAAGTCATTGCTCCTGAGGATTCCAGTGGCGATGATACAATTTGCCAAGTATGTGGATCCCGCGATAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAATGGTTCCATCGGCTGTGGAGTCGGTACCCATATCGATTGCTGCGATCCTCCACTAACAGAAATCCCTGAGGAGGATTGGTTTTGCCCAAAATGCACTACCACCCAAAACTGCCCAACCAATCCCAGTAAAAGGAAAAAGTGTGTTTTATCTTCATCTAAGACCAAGTGA 3987 0.4229 MMETSYSPRGFRGVRFVLCGFHPVAESQIRFKLVSGGGVDVGQYGGSCTHVIVDKIVYDDPVCVAARNDRKTLVTALWVEHSADIGMPVDAASVMYRPLKDLDGIPGAKDLIMCLTGYLRQDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKKLGTIKLVNHRWLEDCLKEWVLLHEDKYNKSSYLFQLIAETLFLFNSGFELEMMEEEAKDSEEEAEDSKLGQSGGRKRKQSPLSSKFGIAATHGLSKSVREPSNALPDSTVPQVLPNVNNGENSSVIPGNENKSDKDLSIHNVDDSKISYQAPDVSRHSTSCQLPDKYVKTSESKNADIPKAPGRQDLGNMGNTNSSGQQPDLHYDTSESKKLVSDLRSTSASAAGVAHSNEQLRTMSHSRKNQRGFPLPRILDKSSCREGNNCENSKVEKASEGIKSASAEASGKGNDIIKEDEPISILLPQKRINEASFTKLKSRKMTADAKFSNPSPNDKSQGLKVTSQVDELPEAGDYFSLGKDGINYSNTCLVSKPAGSTSNSLAFDEPFSRNASPESGQCDNVYQNSPQTAVQWLSESKINGKPDITGSGMRQVDGNEAEQHNVTKSLDCSSLGNKKSHNVESTGCSNLDLSNEESDKLIRKSPRKKSTSKKNFDSKPKVGATARQKSSLTLNKTTLQGDGLTFSSGSKEIATCDAKMHQGCLQILDVNKTMEQETVSKYAEDAGGRTEFLDDETEAPDDKCEYELGMAIDEESVHLSKKSDTATEEKSEAICPATKCEETMPPKKGTNKTEKQKPSSLVVKHRARKRPAGKAKATVSKYAENAGDRTEFLDDTTDAPDDKCEYDLGMALDEESVHLSKKPDTATEEKSEPICPATKCEEAMPPKKGTSKTEKQKPSSQVVKHQARKRPAGKAKATVARELSKSKVAVSGEKIPNEMGHEPEIETVQEMSRPADKSDNLTVPRNKLEKLAEEEKENRPIDVGLAKIKSRKLGHNPSISGSYTRVKTEAVCFILSGHRLQRKEFQQVIKRLKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILQTDFLTASSQAGKFLPEEPYEWHKNGLSEDGTINMEAPRKWRMLKERTGHGAFYGMRIVVYGDCIAPPLDTLKRVIKAGDGTILATSPPYTRFLGTGIDYAVVSPGMPRVDLWVQEFLKHEIPCVVADYLVEYVCKPGFSLERHVLYGTHALAERSFDKLKSRAEEIVEEVIAPEDSSGDDTICQVCGSRDRGDVMLICGDENGSIGCGVGTHIDCCDPPLTEIPEEDWFCPKCTTTQNCPTNPSKRKKCVLSSSKTK 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 598 665 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 351 367 - -
Mupr3545g00011 1328 ProSiteProfiles BRCT domain profile. 1010 1092 IPR001357 -
Mupr3545g00011 1328 SMART PHD_3 1253 1305 IPR001965 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 782 798 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 331 428 - -
Mupr3545g00011 1328 Gene3D BRCT domain 2 94 IPR036420 -
Mupr3545g00011 1328 SUPERFAMILY BRCT domain 109 192 IPR036420 -
Mupr3545g00011 1328 SUPERFAMILY FYVE/PHD zinc finger 1244 1313 IPR011011 -
Mupr3545g00011 1328 SMART BRCT_7 106 183 IPR001357 -
Mupr3545g00011 1328 SMART BRCT_7 1001 1082 IPR001357 -
Mupr3545g00011 1328 SMART BRCT_7 8 86 IPR001357 -
Mupr3545g00011 1328 SMART BRCT_7 1120 1207 IPR001357 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 852 866 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 852 925 - -
Mupr3545g00011 1328 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 7 1319 IPR044254 -
Mupr3545g00011 1328 Pfam twin BRCT domain 111 175 IPR001357 -
Mupr3545g00011 1328 ProSiteProfiles Zinc finger PHD-type profile. 1251 1307 IPR019787 -
Mupr3545g00011 1328 ProSiteProfiles BRCT domain profile. 109 193 IPR001357 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 598 632 - -
Mupr3545g00011 1328 Gene3D BRCT domain 107 195 IPR036420 -
Mupr3545g00011 1328 SUPERFAMILY BRCT domain 1008 1096 IPR036420 -
Mupr3545g00011 1328 SUPERFAMILY BRCT domain 10 91 IPR036420 -
Mupr3545g00011 1328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1218 1319 IPR013083 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 540 563 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 377 397 - -
Mupr3545g00011 1328 Pfam BRCA1 C Terminus (BRCT) domain 1012 1077 IPR001357 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 218 301 - -
Mupr3545g00011 1328 Coils Coil 214 234 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 882 898 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 260 295 - -
Mupr3545g00011 1328 CDD BRCT_TopBP1_rpt7 1009 1082 - -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 633 653 - -
Mupr3545g00011 1328 Pfam PHD-finger 1253 1306 IPR019787 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 778 838 - -
Mupr3545g00011 1328 Gene3D BRCT domain 1001 1118 IPR036420 -
Mupr3545g00011 1328 Gene3D BRCT domain 1119 1217 IPR036420 -
Mupr3545g00011 1328 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3545g00011 Mupr-Chr3545 57600 63772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3545g00011 129 260 Core DNA Replication Machinery Family AT4G02110 53.788 1.50e-32 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr3545g00011 BRCT 1.4e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3545g00011 K10728 - gmx:100799144 2118.2