Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr353g00003 ATGGAGAGAATAGAGAGAAGGGGCAAGAGGGAAGAAATGAAAGACAAGAGAAAGAGCCGGAAAATTGAGTTAACGTTGATGATGGGGAGCCAAAGCCAGAAGAAAGAGTTGGTGGGCGACGACGACGTATTGGCGTCGCCGACGGATGTGCTTGGGGTGCCTATTTCGGGGACGGATTCGGACAGCACGGGGAGTAGCAACTACAGCGGGCCTGAGTCGCCGGGCCTGGGCCCACAACGGACCCAGGGGAGAGAAGGGCAGAACCTGCAATGGAAGGCCATGATGGACGTGTTGAGGTTGAAGTCCGTTAGAAGATTCTCGACCATTCCTATGCTTGCGGCCAGCTACGAGATCTCAAGGAGGAGCCTCAGGAACAAGTTGGCGCGTATTCGAACCGCTAATGAAGATGACGATTTGGATGGCGCTATTGATATTGACGGTATTGCCACCAAGCCTTCTTGGAGGAACTTCACTTACGATGACCTCGTCGCTGCAACGGACGATTTCAGCCCTGAGAATATGATTGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGAAGCTTACCGGATGGTCAAGTTGTAGCAGTGAAGAGGCTAATGAGGAACGAAAAGGAACCTGAGGACAGAGCTGGTCCAGCTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCATATTAACCACCCCAATGCAACACGCTTGATTGGGTTTGGGATCGACCGTGGTCTCTACTTTGTTCTTCAAATGGCCCCACATGGCAGCCTTGCCTCTTTGCTCTTTGGTTCTGAATGTCTAGAGTGGAAGACAAGGTTTAAAGTAGCTGTTGGGGTAGCAAAAGGATTGCAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGATATAAAAGCCTCAAACATATTACTTAAACACAATAACGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAATTGTGGATGAGAAGACTGATGTTTTTGCATTTGGGGTATTGTTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCACTGCTGGATGCAACGTTGATCAAAGACGTGGTAGACCCCAGATTAGAAGAGAAATATGATCCCACAGAAATGAAGTGTGCCATGGCAACGGCTTCCATGTGTATCCATCACATATCCTCTAAGCGGCCATACATGAATCAGGTTGTGCAGCTACTGAAAGGAGAAGAGGTGGCTATTGATCTCAATCAAAGTACAGTAGCTCCAAGATCACTCTTGATAGATGCATGTGACCTGGAAGATTATACTTGCTCTAATTATTTGAACGACCTCAATCGCCACAAGCAGTTACTCTTGGAGTGA 1461 0.4771 MERIERRGKREEMKDKRKSRKIELTLMMGSQSQKKELVGDDDVLASPTDVLGVPISGTDSDSTGSSNYSGPESPGLGPQRTQGREGQNLQWKAMMDVLRLKSVRRFSTIPMLAASYEISRRSLRNKLARIRTANEDDDLDGAIDIDGIATKPSWRNFTYDDLVAATDDFSPENMIGKGGHAEVYKGSLPDGQVVAVKRLMRNEKEPEDRAGPAGDFLSELGIIAHINHPNATRLIGFGIDRGLYFVLQMAPHGSLASLLFGSECLEWKTRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLKHNNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDATLIKDVVDPRLEEKYDPTEMKCAMATASMCIHHISSKRPYMNQVVQLLKGEEVAIDLNQSTVAPRSLLIDACDLEDYTCSNYLNDLNRHKQLLLE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr353g00003 486 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr353g00003 486 PANTHER OS08G0249100 PROTEIN 36 447 IPR046958 -
Mupr353g00003 486 SUPERFAMILY Protein kinase-like (PK-like) 153 447 IPR011009 -
Mupr353g00003 486 SMART serkin_6 169 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr353g00003 486 Gene3D Phosphorylase Kinase; domain 1 143 247 - -
Mupr353g00003 486 MobiDBLite consensus disorder prediction 1 23 - -
Mupr353g00003 486 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 144 249 - -
Mupr353g00003 486 MobiDBLite consensus disorder prediction 1 86 - -
Mupr353g00003 486 Gene3D Transferase(Phosphotransferase) domain 1 250 454 - -
Mupr353g00003 486 Pfam Protein kinase domain 172 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr353g00003 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Mupr353g00003 486 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Mupr353g00003 486 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 251 453 - -
Mupr353g00003 486 MobiDBLite consensus disorder prediction 53 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr353g00003 Mupr-Chr353 10811 16505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr353g00003 129 462 Trihelix Transcription Factor Family AT5G38560 39.710 7.48e-70 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mupr353g00003 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr353g00003 - - gmx:100794225 793.112