Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3538g00005 ATGGCTCTCAAATTCCACACCGTTGAAGAGATCTACGCCGACTTTAGCGGCCGAAGAACCGCTCTTATTGACGCTCTCACTGACCGTAGTGTTGATGAATTTCACAGGCAATGTGATCCAGTTATCGGGGGAATGTTAAATGATACCAGTGTGTTTCTTTTAGATAGGGAAGGCTTGTGCCTCTATGGATTTCCATCCAAGGTCTGGGAAGTAAATCTGCCATCATTGAAATATCTGGCGGACTTCCCTGATCCAACTCCTGGAATCAATTTTCTTAGGGATGGCATGAACCGCAAGGACTGGGTTTCTCTGATTGCCGTGTATAGTGATTCGTGGTTGCTTTCCATGGCCTTTTACCTTGGATCTTGTCTTGACCGCAATGAAAGGAAACGTTTATTTAGTTTGATCAATGGTCTTCCCACCCTTTCTGAAATTGTGAATGGCAAGAATCCAATTGAGTCCAAAGGGGGTAGTGGAAGGAACGAGAGTTATGAGGAGGATTCGGATCAGAAAACATTTACTAGAAATAGCAGTTCAGATGATAGTTCTGAGGGGGATTCAGATGCGCGTAGTGAAACACTTAGTGAAAATGACAATGCAGATGAGCAGAATGAAACGCTTAGCGGAATTGAGAATCCAGATGAAGATGAGAATAGTGAAATAGTTAGTGGAATTGGCAAGGCAGATGAGGGTTATGAAGAGAATGTAGTTATCACAGTTTGCGGAATCTGCGGTGGAAATTTCAATGCAGATCAATGTTGGATCTGCTGCGACAAATGTGACAAGTTGTTCCATGGGAAGTGTGTTAACATTACCCCTGACGAGGCTGAGAGCATGGAGGAATATACA 849 0.4358 MALKFHTVEEIYADFSGRRTALIDALTDRSVDEFHRQCDPVIGGMLNDTSVFLLDREGLCLYGFPSKVWEVNLPSLKYLADFPDPTPGINFLRDGMNRKDWVSLIAVYSDSWLLSMAFYLGSCLDRNERKRLFSLINGLPTLSEIVNGKNPIESKGGSGRNESYEEDSDQKTFTRNSSSDDSSEGDSDARSETLSENDNADEQNETLSGIENPDEDENSEIVSGIGKADEGYEENVVITVCGICGGNFNADQCWICCDKCDKLFHGKCVNITPDEAESMEEYT 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3538g00005 283 SUPERFAMILY FYVE/PHD zinc finger 238 282 IPR011011 -
Mupr3538g00005 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 283 IPR013083 -
Mupr3538g00005 283 Pfam Alfin 7 147 IPR021998 GO:0006355|GO:0042393
Mupr3538g00005 283 PANTHER CPG BINDING PROTEIN 6 282 IPR045104 GO:0006355|GO:0042393
Mupr3538g00005 283 Pfam PHD-finger 240 281 IPR019787 -
Mupr3538g00005 283 MobiDBLite consensus disorder prediction 147 220 - -
Mupr3538g00005 283 MobiDBLite consensus disorder prediction 181 197 - -
Mupr3538g00005 283 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3538g00005 Mupr-Chr3538 34178 36545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3538g00005 6 282 Alfin-like Transcription Factor Family AT5G05610 40.072 1.37e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mupr3538g00005 Alfin 3.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3538g00005 K26274 - mof:131143509 228.794