Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3538g00004 ATGGGCGTGGACTACTACAAGATTCTTCAGGTAGATAAAACCGCCACCGATGACGAACTCAAGAAAGCATATCGAAGGTTAGCCATGAAGTGTCACCCTGATAAGAACCCTACAAACAAGAAAGAGGCTGAAGCTAAATTCAAGCAAATCTCCGAAGCCTATGATGTTTTGAGTGATCCACAGAAGCGAGCAGTGTATGATCAGTACGGTGAGGAGGGGTTGAATGGGGTGCCGCCGGGCACCGGTGGTTTTCCTGGTGGCAGTGATGGTGGGCCGACGACATTCCGGTTTAACCCCAGAAGTGCAGATGATATATTTTCCGAGTTTTTTGGTTATTCGAGCCCCTTTGGTGGTGGTGGTGGAATGGGGGACATGGGTGGCCGGGCTGGTGGCTCTGGATTTTCCAGAGGTGGCACTTTTGGTGAAGATATTTTTGCTCACTTTAGGAGTGGAGCTGGGGAGGGCTCTGGCCACATGCCAAGGAAAGGTGCAGCCATTGAGAAAACGTTGCATTGTAGTTTGGAGGATTTGTATAAAGGGACTACCAAGAAAATGAAGATTTCAAGGGATGTTAATGATTCCAGTGGGAGACCCACCACAGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGGACAAAAATAACTTTTCCAGAAAAGGGAAATGAGCAAAGAGGAGTTATCCCTGCAGACCTTGTCTTTATTATTGATGAGAAGCCTCATAGCCTCTTTAAGAGGGATGGCAATGATCTTGTTGTTACCCAGAAGATATCTCTCGTAGAAGCCTTGACAGGTTACACGGTGCAGCTGACAACCCTTGATGGGCGGAATCTTACGATCCCCATTAACTCTATTGTTAGTCCAACACATGAAGAAGTTGTCAAAGGAGAAGGTATGCCCATTCCCAAAGAACCTTCCAAGAAGGGGAACTTGAGAATCAAGTTCAATATCAAGTTTCCCTCCAGGCTTACATCAGAACAGAAAAGTGGCATCAAGCGATTATTGACATCTCCGTGA 1029 0.4636 MGVDYYKILQVDKTATDDELKKAYRRLAMKCHPDKNPTNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLNGVPPGTGGFPGGSDGGPTTFRFNPRSADDIFSEFFGYSSPFGGGGGMGDMGGRAGGSGFSRGGTFGEDIFAHFRSGAGEGSGHMPRKGAAIEKTLHCSLEDLYKGTTKKMKISRDVNDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTIPINSIVSPTHEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3538g00004 342 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mupr3538g00004 342 SMART dnaj_3 3 62 IPR001623 -
Mupr3538g00004 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 245 IPR008971 GO:0006457|GO:0051082
Mupr3538g00004 342 CDD DnaJ 4 59 IPR001623 -
Mupr3538g00004 342 Gene3D - 164 243 - -
Mupr3538g00004 342 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mupr3538g00004 342 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mupr3538g00004 342 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mupr3538g00004 342 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mupr3538g00004 342 Pfam DnaJ domain 4 67 IPR001623 -
Mupr3538g00004 342 Pfam DnaJ C terminal domain 166 324 IPR002939 -
Mupr3538g00004 342 FunFam DnaJ subfamily B member 13 3 120 - -
Mupr3538g00004 342 Gene3D DnaJ domain 3 120 IPR036869 -
Mupr3538g00004 342 SUPERFAMILY Chaperone J-domain 3 122 IPR036869 -
Mupr3538g00004 342 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 333 IPR008971 GO:0006457|GO:0051082
Mupr3538g00004 342 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mupr3538g00004 342 FunFam DnaJ subfamily B member 13 245 325 - -
Mupr3538g00004 342 CDD DnaJ_C 166 327 - -
Mupr3538g00004 342 FunFam Dnaj homolog subfamily b member 162 243 - -
Mupr3538g00004 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Mupr3538g00004 342 Gene3D - 245 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3538g00004 Mupr-Chr3538 24003 29005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3538g00004 5 69 C2H2 Transcription Factor Family AT1G74250 42.029 2.93e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3538g00004 K09510 - gmx:100818358 577.4